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The Canine lncRNA Project - Le Beguec et al. 2018 [- Scientific Reports -]

 
 Canine   lncRNAs   Project
 

 
  • Circos plots : Dog/Human comparative genomic and transcriptomic
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    display CIRCOS plot : [ select a chromosome ] :


  • Bar Plots : Dog and Human level and distribution of expression
    •  
    display BAR Plot : [ select a chromosome ]


  • Expression profiles : Canine lncRNAs expression level per tissue
    •  
    display lncRNAs expression : [ select a tissue ] :


  • Search lncRNA database

     

    Request example: Browser response :
      
    RLOC_00025302 Lists all data related to lncRNA "RLOC_00025302" with Ensembl and GTex links
    cfa14 Displays all lncRNAs of dog chromosome 14
    RP11* Displays all lncRNAs with RP11* associated information
    PCA3 Displays all of PAC3 lncRNA
    GDNF Displays GDNF antisense lncRNA (GDNF-AS1)
     
  • Supplementary Tables and Figures
    • Supplementary Figures (S1 to S9) and Supplementary Tables (Table_1 to Table_4) for this work :

     

     

    Reference for this work :

    Characterisation and functional predictions of canine long non-coding RNAs. 2018, Scientific Reports
    Celine Le Beguec, Valentin Wucher, Laetitia Lagoutte, Edouard Cadieu, Nadine Botherel, Benoit Hedan, Clotilde De Brito, Anne-Sophie Guillory, Catherine Andre, Thomas Derrien and Christophe Hitte
    - Full text : [- Scientific Reports -]
    - Posted in [- Biorxiv -]

          Questions / Comments : Christophe