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April 28, 2017 , 14h06.

THE CANINE RH10K MAP

Interpreting the map :

The CFA37 RH map is reported in the centromere-telomere orientation.
column 1 - marker position
column 2&3 - marker number Id.
column 4 - consensus %
column 5 - graphic bars
column 6 to 12 - the five maps data
column 7 - marker name
column 8 - cumulated distance in cR


The RH map shows the 5 maps automatically delivered by rh_tsp_map2  
program. Results of the comparison of these five maps is enlighted by  
horizontal bars of variable lengths. When a marker is present on the  
five maps at the same position, the horizontal bar has a maximum length  
and corresponds to mapping positions reaching high confidence and when  
a marker is present in the five maps at different positions, the  
horizontal bar has a shorter length reflecting a lower confidence level  
(at the top, a scale of 0 to 100% reflects the confidence level of the  
position of each marker). A consensus map follows the 5 maps computed  
by rh_tsp_map2. It corresponds to the markers having the best score at  
each position. Marker names of the consensus map are indicated in the  
penultimate column. The rightest column reports the cumulative distance  
between RH markers in centiRay (cR).
==================================================================
canine chromosome37
-143: marker 88/128  40%    |========               [ 128 128 68  88  88  ] GENE8532       -0   
-142: marker 75/125  40%    |========               [ 75  75  88  125 125 ] GENE2632       22.37
-141: marker 89/68   40%    |========               [ 68  68  125 89  89  ] GENE8529       86.8 
-140: marker 88/65   40%    |========               [ 88  88  89  65  65  ] GENE991        158.92
-139: marker 66/125  40%    |========               [ 125 125 65  66  66  ] GENE993        167.42
-138: marker 90/89   40%    |========               [ 89  89  66  90  90  ] GENE6896       195.55
-137: marker 65/92   40%    |========               [ 65  65  90  67  92  ] GENE994        212.09
-136: marker 93/66   40%    |========               [ 66  66  93  142 93  ] GENE6893       219.87
-135: marker 90/92   40%    |========               [ 90  90  92  91  68  ] GENE6895       248.24
-134: marker 93/140  40%    |========               [ 93  93  140 69  140 ] C37_375-L11    279.25
-133: marker 92/69   40%    |========               [ 92  92  69  140 69  ] GENE6894       282.07
-132: marker 91/69   40%    |========               [ 69  69  91  68  91  ] GENE990        290.64
-131: marker 142/140 40%    |========               [ 140 140 142 93  142 ] C37_372-I18    293.35
-130: marker 91/67   40%    |========               [ 91  91  67  92  67  ] GENE992        298.96
-129: marker 70      60%    |============           [ 142 142 70  70  70  ] GENE988        304.62
-128: marker 94      60%    |============           [ 67  67  94  94  94  ] GENE6891       312.9
-127: marker 138     60%    |============           [ 70  70  138 138 138 ] C37_381-P1     330.55
-126: marker 94/73   40%    |========               [ 94  94  73  129 73  ] GENE983        342.49
-125: marker 71/138  40%    |========               [ 138 138 71  72  71  ] GENE6888       360.62
-124: marker 73      60%    |============           [ 73  73  97  73  97  ] GENE6890       379.75
-123: marker 71      60%    |============           [ 71  71  129 71  95  ] GENE986        404.79
-122: marker 97      60%    |============           [ 97  97  72  97  96  ] GENE6887       425.68
-121: marker 72      60%    |============           [ 72  72  95  95  72  ] GENE984        431.59
-120: marker 129     60%    |============           [ 129 129 96  96  129 ] GENE12149      431.59
-119: marker 130     60%    |============           [ 95  95  130 130 130 ] GENE12148      434.7
-118: marker 131     60%    |============           [ 96  96  131 131 131 ] GENE12147      437.7
-117: marker 98      60%    |============           [ 130 130 98  98  98  ] GENE6886       444.07
-116: marker 99      60%    |============           [ 131 131 99  99  99  ] GENE6885       447.47
-115: marker 74      60%    |============           [ 98  98  74  74  74  ] GENE980        463.79
-114: marker 132     60%    |============           [ 99  99  132 132 132 ] GENE12146      491.57
-113: marker 133     80%    |================       [ 133 133 127 133 133 ] GENE12145      507.47
-112: marker 127     80%    |================       [ 127 127 133 127 127 ] GENE12950      510.28
-111: marker 134     60%    |============           [ 132 132 134 134 134 ] GENE12144      513.14
-110: marker 102     60%    |============           [ 74  74  102 102 102 ] GENE6881       516.1
-109: marker 101     60%    |============           [ 100 100 101 101 101 ] GENE6882       526.01
-108: marker 100     60%    |============           [ 101 101 100 100 100 ] GENE6883       536.36
-107: marker 75      60%    |============           [ 102 102 75  75  75  ] GENE977        539.59
-106: marker 128     60%    |============           [ 134 134 128 128 128 ] GENE12949      545.73
-105: marker 106/103 40%    |========               [ 103 103 106 104 106 ] GENE6876       571.59
-104: marker 143/79  40%    |========               [ 143 143 79  106 78  ] GENE972        577.45
-103: marker 79/76   40%    |========               [ 76  76  78  79  79  ] GENE971        586.47
-102: marker 141/135 40%    |========               [ 135 135 141 78  141 ] C37_375-D17    595.33
-101: marker 107     60%    |============           [ 107 141 107 141 107 ] GENE6875       601.13
-100: marker 135/107 40%    |========               [ 141 107 135 107 135 ] GENE12142      601.13
-99:  marker 103/79  40%    |========               [ 79  78  103 135 103 ] GENE6880       604.01
-98:  marker 143/79  40%    |========               [ 78  79  143 103 143 ] C37_372-C15    604.01
-97:  marker 76/106  40%    |========               [ 106 106 76  143 76  ] GENE974        607  
-96:  marker 77      60%    |============           [ 77  104 77  76  77  ] GENE973        613.07
-95:  marker 104     60%    |============           [ 104 77  104 77  104 ] GENE6878       619.09
-94:  marker 105     100%   |====================   [ 105 105 105 105 105 ] GENE6877       628.52
-93:  marker 108     80%    |================       [ 108 108 108 80  108 ] GENE6874       637.81
-92:  marker 80      80%    |================       [ 80  80  80  108 80  ] GENE969        637.81
-91:  marker 136     100%   |====================   [ 136 136 136 136 136 ] GENE12140      643.83
-90:  marker 82      100%   |====================   [ 82  82  82  82  82  ] GENE966        681.68
-89:  marker 112     100%   |====================   [ 112 112 112 112 112 ] GENE6870       685.03
-88:  marker 111     100%   |====================   [ 111 111 111 111 111 ] GENE6871       691.97
-87:  marker 110     100%   |====================   [ 110 110 110 110 110 ] GENE6872       695.36
-86:  marker 126     100%   |====================   [ 126 126 126 126 126 ] GENE1761       709.7
-85:  marker 81      100%   |====================   [ 81  81  81  81  81  ] GENE968        713.19
-84:  marker 109     100%   |====================   [ 109 109 109 109 109 ] GENE6873       720.97
-83:  marker 113     100%   |====================   [ 113 113 113 113 113 ] GENE6869       750.88
-82:  marker 114     100%   |====================   [ 114 114 114 114 114 ] GENE6868       766.16
-81:  marker 139     100%   |====================   [ 139 139 139 139 139 ] C37_376-N7     785.47
-80:  marker 116     100%   |====================   [ 116 116 116 116 116 ] GENE6866       806.57
-79:  marker 83      100%   |====================   [ 83  83  83  83  83  ] GENE963        821.02
-78:  marker 115     100%   |====================   [ 115 115 115 115 115 ] GENE6867       832.17
-77:  marker 137     100%   |====================   [ 137 137 137 137 137 ] C37_EST22D1    839.69
-76:  marker 117     100%   |====================   [ 117 117 117 117 117 ] GENE6865       850.2
-75:  marker 84      100%   |====================   [ 84  84  84  84  84  ] GENE960        871.18
-74:  marker 118     100%   |====================   [ 118 118 118 118 118 ] GENE6864       881.05
-73:  marker 119     100%   |====================   [ 119 119 119 119 119 ] GENE6863       890.74
-72:  marker 85      100%   |====================   [ 85  85  85  85  85  ] GENE958        903.47
-71:  marker 120     100%   |====================   [ 120 120 120 120 120 ] GENE6862       919.11
-70:  marker 86      60%    |============           [ 86  86  121 86  121 ] GENE956        938.28
-69:  marker 121     60%    |============           [ 121 121 86  121 86  ] GENE6861       941.32
-68:  marker 87      100%   |====================   [ 87  87  87  87  87  ] GENE954        954.45
-67:  marker 123     100%   |====================   [ 123 123 123 123 123 ] GENE6859       957.72
-66:  marker 122     100%   |====================   [ 122 122 122 122 122 ] GENE6860       976.43
-65:  marker 124     100%   |====================   [ 124 124 124 124 124 ] GENE6858       998.08
-64:  marker 19      100%   |====================   [ 19  19  19  19  19  ] GENE6856       1059.61
-63:  marker 18      100%   |====================   [ 18  18  18  18  18  ] GENE6857       1087.57
-62:  marker 20      100%   |====================   [ 20  20  20  20  20  ] GENE6855       1124.22
-61:  marker 3       100%   |====================   [ 3   3   3   3   3   ] GENE950        1138.76
-60:  marker 1       100%   |====================   [ 1   1   1   1   1   ] GENE952        1154.82
-59:  marker 59      100%   |====================   [ 59  59  59  59  59  ] GENE11770      1154.82
-58:  marker 2       100%   |====================   [ 2   2   2   2   2   ] GENE951        1166.65
-57:  marker 21      100%   |====================   [ 21  21  21  21  21  ] GENE6854       1197.7
-56:  marker 22      100%   |====================   [ 22  22  22  22  22  ] GENE6853       1215.63
-55:  marker 60      100%   |====================   [ 60  60  60  60  60  ] C37_385-F13    1221.3
-54:  marker 46      100%   |====================   [ 46  46  46  46  46  ] GENE12948      1227.02
-53:  marker 48      100%   |====================   [ 48  48  48  48  48  ] GENE12134      1229.8
-52:  marker 23      100%   |====================   [ 23  23  23  23  23  ] GENE6850       1267.65
-51:  marker 5/24    40%    |========               [ 5   5   24  4   24  ] GENE943        1345.47
-50:  marker 24      60%    |============           [ 24  24  5   24  5   ] GENE6849       1374.63
-49:  marker 4/5     40%    |========               [ 4   4   26  5   49  ] GENE945        1400.04
-48:  marker 27      60%    |============           [ 27  27  28  27  50  ] GENE6845       1406.32
-47:  marker 28      60%    |============           [ 28  28  27  28  25  ] GENE6844       1409.38
-46:  marker 26      80%    |================       [ 26  26  4   26  26  ] GENE6847       1415.97
-45:  marker 25      60%    |============           [ 25  25  49  25  28  ] GENE6848       1419.32
-44:  marker 49      60%    |============           [ 49  49  25  49  27  ] GENE12133      1422.55
-43:  marker 50      80%    |================       [ 50  50  50  50  4   ] GENE12132      1429.01
-42:  marker 51      100%   |====================   [ 51  51  51  51  51  ] GENE12130      1444.6
-41:  marker 52      100%   |====================   [ 52  52  52  52  52  ] GENE12129      1459.29
-40:  marker 29      100%   |====================   [ 29  29  29  29  29  ] GENE6843       1474.29
-39:  marker 6       100%   |====================   [ 6   6   6   6   6   ] GENE938        1479.96
-38:  marker 53      100%   |====================   [ 53  53  53  53  53  ] GENE12128      1485.45
-37:  marker 7       80%    |================       [ 7   7   7   30  7   ] GENE937        1493.63
-36:  marker 62      80%    |================       [ 62  62  62  7   62  ] C37_374-I17    1502.06
-35:  marker 32      80%    |================       [ 32  32  32  62  32  ] GENE6840       1504.98
-34:  marker 31      80%    |================       [ 31  31  31  32  31  ] GENE6841       1514.3
-33:  marker 30      80%    |================       [ 30  30  30  31  30  ] GENE6842       1529.5
-32:  marker 8       80%    |================       [ 8   8   8   64  8   ] GENE935        1557.94
-31:  marker 64      80%    |================       [ 64  64  64  8   64  ] C37_281-H8     1576.91
-30:  marker 47      100%   |====================   [ 47  47  47  47  47  ] GENE12947      1592.43
-29:  marker 33      100%   |====================   [ 33  33  33  33  33  ] GENE6838       1601.41
-28:  marker 9       100%   |====================   [ 9   9   9   9   9   ] GENE934        1616.33
-27:  marker 34      100%   |====================   [ 34  34  34  34  34  ] GENE6837       1627.14
-26:  marker 35      100%   |====================   [ 35  35  35  35  35  ] GENE6836       1641.23
-25:  marker 10      100%   |====================   [ 10  10  10  10  10  ] GENE931        1652.6
-24:  marker 37      80%    |================       [ 37  37  37  37  17  ] GENE6834       1660.97
-23:  marker 38      60%    |============           [ 38  38  38  17  36  ] GENE6832       1675.33
-22:  marker 17      60%    |============           [ 17  17  17  36  54  ] GENE8074       1739.84
-21:  marker 36      60%    |============           [ 36  36  36  54  11  ] GENE6835       1793.31
-20:  marker 54      60%    |============           [ 54  54  54  11  37  ] GENE12125      1811.78
-19:  marker 11      60%    |============           [ 11  11  11  38  38  ] GENE929        1825.1
-18:  marker 55      100%   |====================   [ 55  55  55  55  55  ] GENE12124      1858.06
-17:  marker 12      100%   |====================   [ 12  12  12  12  12  ] GENE927        1869.37
-16:  marker 63      100%   |====================   [ 63  63  63  63  63  ] C37_372-A24    1887.3
-15:  marker 61      100%   |====================   [ 61  61  61  61  61  ] C37_382-C2     1914.28
-14:  marker 39      100%   |====================   [ 39  39  39  39  39  ] GENE6831       1934.03
-13:  marker 40      100%   |====================   [ 40  40  40  40  40  ] GENE6830       1969.24
-12:  marker 56      100%   |====================   [ 56  56  56  56  56  ] GENE12123      1999.36
-11:  marker 13      100%   |====================   [ 13  13  13  13  13  ] GENE925        2009.65
-10:  marker 41      100%   |====================   [ 41  41  41  41  41  ] GENE6829       2026.33
-9:   marker 42      100%   |====================   [ 42  42  42  42  42  ] GENE6828       2058.39
-8:   marker 57      80%    |================       [ 57  57  14  57  57  ] GENE12122      2076.97
-7:   marker 14      80%    |================       [ 14  14  57  14  14  ] GENE923        2087.06
-6:   marker 43      100%   |====================   [ 43  43  43  43  43  ] GENE6827       2102.86
-5:   marker 58      100%   |====================   [ 58  58  58  58  58  ] GENE12121      2125.49
-4:   marker 44      100%   |====================   [ 44  44  44  44  44  ] GENE6825       2142.13
-3:   marker 15      100%   |====================   [ 15  15  15  15  15  ] GENE921        2164.62
-2:   marker 16      100%   |====================   [ 16  16  16  16  16  ] GENE919        2185.76
-1:   marker 45      100%   |====================   [ 45  45  45  45  45  ] GENE6823       2215.06