back
May 30, 2023 , 20h20.
Interpreting the map : The CFA36 RH map is reported in the centromere-telomere orientation. column 1 - marker position column 2&3 - marker number Id. column 4 - consensus % column 5 - graphic bars column 6 to 12 - the five maps data column 7 - marker name column 8 - cumulated distance in cR The RH map shows the 5 maps automatically delivered by rh_tsp_map2 program. Results of the comparison of these five maps is enlighted by horizontal bars of variable lengths. When a marker is present on the five maps at the same position, the horizontal bar has a maximum length and corresponds to mapping positions reaching high confidence and when a marker is present in the five maps at different positions, the horizontal bar has a shorter length reflecting a lower confidence level (at the top, a scale of 0 to 100% reflects the confidence level of the position of each marker). A consensus map follows the 5 maps computed by rh_tsp_map2. It corresponds to the markers having the best score at each position. Marker names of the consensus map are indicated in the penultimate column. The rightest column reports the cumulative distance between RH markers in centiRay (cR).==================================================================
-1: marker 60 60% |============ [ 60 60 60 38 38 ] GENE6791 0 -2: marker 59 60% |============ [ 59 59 59 111 111 ] GENE6794 17.55 -3: marker 13 60% |============ [ 13 13 13 1 1 ] GENE899 46.88 -4: marker 9 60% |============ [ 9 9 9 93 93 ] GENE903 61.94 -5: marker 6 60% |============ [ 6 6 6 39 39 ] GENE907 118.55 -6: marker 4 60% |============ [ 4 4 4 40 40 ] GENE909 154.23 -7: marker 93 60% |============ [ 93 93 93 2 2 ] GENE12119 253.72 -8: marker 41/1 40% |======== [ 1 1 38 41 41 ] GENE917 270.47 -9: marker 111 60% |============ [ 111 111 111 3 3 ] C36_EST5B1 279.91 -10: marker 38/94 40% |======== [ 38 38 1 94 43 ] GENE6822 288.8 -11: marker 42/2 40% |======== [ 2 2 40 42 42 ] GENE915 329.32 -12: marker 39/94 40% |======== [ 40 39 39 43 94 ] GENE6821 337.77 -13: marker 44/40 40% |======== [ 39 40 2 44 44 ] GENE6820 343.52 -14: marker 41 60% |============ [ 41 41 41 4 95 ] GENE6819 355.19 -15: marker 3 60% |============ [ 3 3 3 6 4 ] GENE913 388.68 -16: marker 42 60% |============ [ 42 42 42 95 6 ] GENE6816 425.63 -17: marker 94 60% |============ [ 94 94 94 88 88 ] GENE12115 430.91 -18: marker 43 60% |============ [ 43 43 43 46 46 ] GENE6815 436.15 -19: marker 44 60% |============ [ 44 44 44 5 5 ] GENE6814 453.13 -20: marker 95 60% |============ [ 95 95 95 45 45 ] GENE12114 463.85 -21: marker 88/47 40% |======== [ 88 88 45 47 47 ] GENE2885 471.88 -22: marker 86/46 40% |======== [ 46 46 5 86 86 ] GENE6812 474.56 -23: marker 7/5 40% |======== [ 5 5 46 7 7 ] GENE908 482.7 -24: marker 48/45 40% |======== [ 45 45 88 48 48 ] GENE6813 487.88 -25: marker 8/47 40% |======== [ 47 47 86 8 8 ] GENE6811 503.7 -26: marker 86/11 40% |======== [ 86 86 47 11 11 ] GENE47 503.7 -27: marker 7 60% |============ [ 7 7 7 49 49 ] GENE906 517.62 -28: marker 48 60% |============ [ 48 48 48 96 96 ] GENE6810 557.11 -29: marker 8 60% |============ [ 8 8 8 50 50 ] GENE904 577.56 -30: marker 11 60% |============ [ 11 11 11 10 10 ] GENE901 591.39 -31: marker 49 60% |============ [ 49 49 49 51 51 ] GENE6808 593.95 -32: marker 96 60% |============ [ 96 96 96 52 52 ] GENE12113 599.25 -33: marker 50 60% |============ [ 50 50 50 12 53 ] GENE6807 601.79 -34: marker 51 60% |============ [ 51 51 51 53 12 ] GENE6806 606.7 -35: marker 10 60% |============ [ 10 10 10 54 54 ] GENE902 614.13 -36: marker 52 60% |============ [ 52 52 52 56 56 ] GENE6805 633.26 -37: marker 69/12 40% |======== [ 12 53 12 69 69 ] GENE900 649.8 -38: marker 98/53 40% |======== [ 53 12 53 98 98 ] GENE6804 657.36 -39: marker 54 60% |============ [ 54 54 54 97 97 ] GENE6803 672.87 -40: marker 55 100% |==================== [ 55 55 55 55 55 ] GENE6802 689.28 -41: marker 97 60% |============ [ 97 97 97 9 9 ] GENE12112 703.36 -42: marker 98 60% |============ [ 98 98 98 13 13 ] GENE12111 708.65 -43: marker 56 60% |============ [ 56 56 56 59 59 ] GENE6801 716.4 -44: marker 69 60% |============ [ 69 69 69 60 60 ] GENE6779 723.9 -45: marker 57 80% |================ [ 57 57 117 57 57 ] GENE6798 743.41 -46: marker 117 80% |================ [ 117 117 14 117 117 ] C36_376-D17 760.52 -47: marker 14 80% |================ [ 14 14 15 14 14 ] GENE894 768.3 -48: marker 15 80% |================ [ 15 15 57 15 15 ] GENE893 773.68 -49: marker 99 60% |============ [ 99 99 58 99 58 ] GENE12109 776.51 -50: marker 58 60% |============ [ 58 58 99 58 99 ] GENE6797 787.34 -51: marker 100 100% |==================== [ 100 100 100 100 100 ] GENE12108 803.45 -52: marker 119 100% |==================== [ 119 119 119 119 119 ] C36_373-G18 814.76 -53: marker 16 100% |==================== [ 16 16 16 16 16 ] GENE889 814.76 -54: marker 101 100% |==================== [ 101 101 101 101 101 ] GENE12107 822.9 -55: marker 87 100% |==================== [ 87 87 87 87 87 ] GENE4072 831.03 -56: marker 17 100% |==================== [ 17 17 17 17 17 ] GENE885 841.96 -57: marker 103 100% |==================== [ 103 103 103 103 103 ] GENE12104 852.46 -58: marker 102 100% |==================== [ 102 102 102 102 102 ] GENE12105 863.1 -59: marker 18 100% |==================== [ 18 18 18 18 18 ] GENE884 874.48 -60: marker 61 100% |==================== [ 61 61 61 61 61 ] GENE6788 886.31 -61: marker 62 100% |==================== [ 62 62 62 62 62 ] GENE6787 904.7 -62: marker 104 100% |==================== [ 104 104 104 104 104 ] GENE12103 918.83 -63: marker 19 100% |==================== [ 19 19 19 19 19 ] GENE882 932.22 -64: marker 68 100% |==================== [ 68 68 68 68 68 ] GENE6780 974.46 -65: marker 24 100% |==================== [ 24 24 24 24 24 ] GENE874 997.66 -66: marker 23 100% |==================== [ 23 23 23 23 23 ] GENE875 1005.3 -67: marker 105 100% |==================== [ 105 105 105 105 105 ] GENE12101 1013.17 -68: marker 112 100% |==================== [ 112 112 112 112 112 ] C36_385-L23 1021.04 -69: marker 67 100% |==================== [ 67 67 67 67 67 ] GENE6781 1021.04 -70: marker 65 60% |============ [ 90 65 90 65 65 ] GENE6784 1023.58 -71: marker 90 60% |============ [ 65 90 65 90 90 ] GENE12943 1023.58 -72: marker 22 100% |==================== [ 22 22 22 22 22 ] GENE878 1043.98 -73: marker 21 100% |==================== [ 21 21 21 21 21 ] GENE879 1049.68 -74: marker 66 100% |==================== [ 66 66 66 66 66 ] GENE6783 1060.77 -75: marker 20 100% |==================== [ 20 20 20 20 20 ] GENE881 1075.06 -76: marker 63 100% |==================== [ 63 63 63 63 63 ] GENE6786 1100.31 -77: marker 64 100% |==================== [ 64 64 64 64 64 ] GENE6785 1118.76 -78: marker 70 100% |==================== [ 70 70 70 70 70 ] GENE6777 1149.77 -79: marker 71 100% |==================== [ 71 71 71 71 71 ] GENE6776 1187.28 -80: marker 27 100% |==================== [ 27 27 27 27 27 ] GENE871 1243.03 -81: marker 115 60% |============ [ 115 115 115 28 28 ] C36_381-K17 1286.83 -82: marker 84 80% |================ [ 84 84 84 84 115 ] GENE6492 1291.99 -83: marker 26 60% |============ [ 26 26 26 115 84 ] GENE872 1307.49 -84: marker 25 60% |============ [ 25 25 25 26 26 ] GENE873 1309.87 -85: marker 89 60% |============ [ 89 89 89 25 25 ] GENE2852 1322.68 -86: marker 28 60% |============ [ 28 28 28 89 89 ] GENE870 1336.07 -87: marker 72 100% |==================== [ 72 72 72 72 72 ] GENE6774 1346.58 -88: marker 29 100% |==================== [ 29 29 29 29 29 ] GENE869 1354.14 -89: marker 73 100% |==================== [ 73 73 73 73 73 ] GENE6773 1364.31 -90: marker 114 100% |==================== [ 114 114 114 114 114 ] C36_382-K16 1382.93 -91: marker 113 100% |==================== [ 113 113 113 113 113 ] C36_385-A1 1398.89 -92: marker 116 100% |==================== [ 116 116 116 116 116 ] C36_381-B15 1417.49 -93: marker 74 100% |==================== [ 74 74 74 74 74 ] GENE6772 1427.47 -94: marker 30 60% |============ [ 30 30 30 106 106 ] GENE867 1443.54 -95: marker 106 60% |============ [ 106 106 106 30 30 ] GENE12100 1451.21 -96: marker 75 100% |==================== [ 75 75 75 75 75 ] GENE6771 1461.36 -97: marker 108 100% |==================== [ 108 108 108 108 108 ] GENE12098 1474.16 -98: marker 76 100% |==================== [ 76 76 76 76 76 ] GENE6770 1478.96 -99: marker 107 100% |==================== [ 107 107 107 107 107 ] GENE12099 1483.79 -100: marker 109 100% |==================== [ 109 109 109 109 109 ] GENE12097 1511.42 -101: marker 91 100% |==================== [ 91 91 91 91 91 ] GENE12941 1533.12 -102: marker 31 60% |============ [ 31 31 77 77 31 ] GENE863 1546.06 -103: marker 77 60% |============ [ 77 77 31 31 77 ] GENE6765 1556.23 -104: marker 32 100% |==================== [ 32 32 32 32 32 ] GENE861 1566.3 -105: marker 33 100% |==================== [ 33 33 33 33 33 ] GENE860 1581.67 -106: marker 78 100% |==================== [ 78 78 78 78 78 ] GENE6764 1589.03 -107: marker 79 100% |==================== [ 79 79 79 79 79 ] GENE6763 1607.46 -108: marker 34 100% |==================== [ 34 34 34 34 34 ] GENE858 1629.7 -109: marker 118 100% |==================== [ 118 118 118 118 118 ] C36_375-J19 1648.75 -110: marker 80 100% |==================== [ 80 80 80 80 80 ] GENE6762 1656.24 -111: marker 81 100% |==================== [ 81 81 81 81 81 ] GENE6761 1680.6 -112: marker 82 100% |==================== [ 82 82 82 82 82 ] GENE6760 1710.49 -113: marker 35 100% |==================== [ 35 35 35 35 35 ] GENE856 1725.56 -114: marker 36 100% |==================== [ 36 36 36 36 36 ] GENE855 1740.72 -115: marker 92 100% |==================== [ 92 92 92 92 92 ] GENE12700 1755.85 -116: marker 85 80% |================ [ 85 85 85 110 85 ] GENE5340 1763.21 -117: marker 110 80% |================ [ 110 110 110 85 110 ] C36_EST9E7 1782.31 -118: marker 37 100% |==================== [ 37 37 37 37 37 ] GENE853 1847.12 -119: marker 83 100% |==================== [ 83 83 83 83 83 ] GENE6757 1862.34