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November 29, 2023 , 02h05.
Interpreting the map : The CFA34 RH map is reported in the centromere-telomere orientation. column 1 - marker position column 2&3 - marker number Id. column 4 - consensus % column 5 - graphic bars column 6 to 12 - the five maps data column 7 - marker name column 8 - cumulated distance in cR The RH map shows the 5 maps automatically delivered by rh_tsp_map2 program. Results of the comparison of these five maps is enlighted by horizontal bars of variable lengths. When a marker is present on the five maps at the same position, the horizontal bar has a maximum length and corresponds to mapping positions reaching high confidence and when a marker is present in the five maps at different positions, the horizontal bar has a shorter length reflecting a lower confidence level (at the top, a scale of 0 to 100% reflects the confidence level of the position of each marker). A consensus map follows the 5 maps computed by rh_tsp_map2. It corresponds to the markers having the best score at each position. Marker names of the consensus map are indicated in the penultimate column. The rightest column reports the cumulative distance between RH markers in centiRay (cR).==================================================================
-147: marker 39 100% |==================== [ 39 39 39 39 39 ] GENE7258 -0 -146: marker 40 100% |==================== [ 40 40 40 40 40 ] GENE7257 21.04 -145: marker 41 100% |==================== [ 41 41 41 41 41 ] GENE7256 60.11 -144: marker 95 60% |============ [ 128 128 95 95 95 ] GENE1353 82.76 -143: marker 128 60% |============ [ 95 95 128 128 128 ] GENE12268 82.76 -142: marker 96 80% |================ [ 96 96 96 96 42 ] GENE1352 88.53 -141: marker 42 80% |================ [ 42 42 42 42 96 ] GENE7255 88.53 -140: marker 97 60% |============ [ 97 43 43 97 97 ] GENE1351 94.39 -139: marker 43 60% |============ [ 43 97 97 43 43 ] GENE7254 94.39 -138: marker 44 80% |================ [ 44 44 138 44 44 ] GENE7253 97.31 -137: marker 138 80% |================ [ 138 138 44 138 138 ] C34_EST13H8 97.31 -136: marker 98 100% |==================== [ 98 98 98 98 98 ] GENE1350 100.38 -135: marker 45 100% |==================== [ 45 45 45 45 45 ] GENE7252 110.12 -134: marker 99 100% |==================== [ 99 99 99 99 99 ] GENE1349 120.4 -133: marker 46 100% |==================== [ 46 46 46 46 46 ] GENE7251 123.7 -132: marker 100 100% |==================== [ 100 100 100 100 100 ] GENE1348 126.89 -131: marker 144 60% |============ [ 144 144 101 144 101 ] C34_375-A18 136.63 -130: marker 47 80% |================ [ 47 47 47 48 47 ] GENE7250 142.87 -129: marker 101 60% |============ [ 101 101 48 101 48 ] GENE1347 146 -128: marker 48/144 40% |======== [ 48 48 144 47 144 ] GENE7249 149.2 -127: marker 49 60% |============ [ 49 49 49 102 102 ] GENE7248 162.39 -126: marker 102 60% |============ [ 102 102 102 49 49 ] GENE1346 168.6 -125: marker 103 60% |============ [ 103 103 103 104 104 ] GENE1345 171.57 -124: marker 104 60% |============ [ 104 104 104 103 103 ] GENE1344 171.57 -123: marker 51 80% |================ [ 51 51 51 51 50 ] GENE7246 174.56 -122: marker 50 80% |================ [ 50 50 50 50 51 ] GENE7247 174.56 -121: marker 52 100% |==================== [ 52 52 52 52 52 ] GENE7245 186.45 -120: marker 129 60% |============ [ 129 129 105 55 129 ] GENE12267 204.36 -119: marker 105/54 40% |======== [ 105 105 129 143 54 ] GENE1342 204.36 -118: marker 54 60% |============ [ 54 54 54 130 105 ] GENE7243 204.36 -117: marker 55/53 40% |======== [ 55 55 143 107 53 ] GENE7242 207.13 -116: marker 130/55 40% |======== [ 130 130 55 53 106 ] GENE12266 207.13 -115: marker 143/130 40% |======== [ 143 143 130 106 107 ] C34_376-B23 207.13 -114: marker 107 60% |============ [ 107 107 107 54 55 ] GENE1339 207.13 -113: marker 106 60% |============ [ 106 106 106 105 143 ] GENE1341 212.9 -112: marker 53 60% |============ [ 53 53 53 129 130 ] GENE7244 215.8 -111: marker 131 100% |==================== [ 131 131 131 131 131 ] GENE12265 265.63 -110: marker 132 100% |==================== [ 132 132 132 132 132 ] GENE12264 290.5 -109: marker 108 100% |==================== [ 108 108 108 108 108 ] GENE1338 299.7 -108: marker 109 100% |==================== [ 109 109 109 109 109 ] GENE1337 319.29 -107: marker 133 100% |==================== [ 133 133 133 133 133 ] GENE12263 359.28 -106: marker 57 100% |==================== [ 57 57 57 57 57 ] GENE7237 365.8 -105: marker 110 100% |==================== [ 110 110 110 110 110 ] GENE1336 372.33 -104: marker 56 100% |==================== [ 56 56 56 56 56 ] GENE7239 375.5 -103: marker 140 100% |==================== [ 140 140 140 140 140 ] C34_382-C18 399.6 -102: marker 141 60% |============ [ 141 111 111 141 141 ] C34_381-E7 408.97 -101: marker 58 60% |============ [ 58 134 134 58 58 ] GENE7235 415.19 -100: marker 137 80% |================ [ 137 137 112 137 137 ] C34_EST19E1 418.4 -99: marker 135/137 40% |======== [ 135 135 137 134 111 ] GENE12261 418.4 -98: marker 112 80% |================ [ 112 112 135 112 112 ] GENE1333 418.4 -97: marker 58/111 40% |======== [ 111 58 58 111 134 ] GENE1334 421.85 -96: marker 141/135 40% |======== [ 134 141 141 135 135 ] GENE12262 428.77 -95: marker 113 60% |============ [ 113 59 59 113 113 ] GENE1332 445.35 -94: marker 59 60% |============ [ 59 113 113 59 59 ] GENE7234 454.52 -93: marker 72 80% |================ [ 72 72 73 72 72 ] GENE1388 470.93 -92: marker 18 80% |================ [ 18 18 72 18 18 ] GENE7290 470.93 -91: marker 73 80% |================ [ 73 73 18 73 73 ] GENE1387 470.93 -90: marker 19 100% |==================== [ 19 19 19 19 19 ] GENE7289 480.41 -89: marker 115 100% |==================== [ 115 115 115 115 115 ] GENE12284 495.93 -88: marker 74 100% |==================== [ 74 74 74 74 74 ] GENE1386 515.59 -87: marker 116 100% |==================== [ 116 116 116 116 116 ] GENE12283 518.78 -86: marker 75 100% |==================== [ 75 75 75 75 75 ] GENE1384 518.78 -85: marker 20 100% |==================== [ 20 20 20 20 20 ] GENE7287 518.78 -84: marker 21 100% |==================== [ 21 21 21 21 21 ] GENE7286 534.36 -83: marker 76 100% |==================== [ 76 76 76 76 76 ] GENE1383 549.56 -82: marker 77 100% |==================== [ 77 77 77 77 77 ] GENE1382 559.58 -81: marker 146 100% |==================== [ 146 146 146 146 146 ] C34_374-K19 573.26 -80: marker 22 100% |==================== [ 22 22 22 22 22 ] GENE7285 576.29 -79: marker 23 100% |==================== [ 23 23 23 23 23 ] GENE7284 604 -78: marker 25 60% |============ [ 25 25 117 117 25 ] GENE7282 628.09 -77: marker 78 80% |================ [ 78 117 78 78 78 ] GENE1380 637.69 -76: marker 24 80% |================ [ 24 78 24 24 24 ] GENE7283 637.69 -75: marker 25/117 40% |======== [ 117 24 25 25 117 ] GENE12282 640.86 -74: marker 79 60% |============ [ 79 79 26 26 79 ] GENE1379 654.4 -73: marker 80 60% |============ [ 80 80 28 27 80 ] GENE1378 675.51 -72: marker 81 60% |============ [ 81 81 27 80 81 ] GENE1377 695.51 -71: marker 82 60% |============ [ 82 82 80 79 82 ] GENE1376 701.35 -70: marker 26/81 40% |======== [ 26 26 79 81 27 ] GENE7281 716.48 -69: marker 27/82 40% |======== [ 27 27 81 82 26 ] GENE7280 722.2 -68: marker 28 80% |================ [ 28 28 82 28 28 ] GENE7279 727.83 -67: marker 29 100% |==================== [ 29 29 29 29 29 ] GENE7278 736.17 -66: marker 30 100% |==================== [ 30 30 30 30 30 ] GENE7277 736.17 -65: marker 31 100% |==================== [ 31 31 31 31 31 ] GENE7276 738.89 -64: marker 145 60% |============ [ 145 145 83 83 145 ] C34_374-K23 741.64 -63: marker 83 60% |============ [ 83 83 145 145 83 ] GENE1374 741.64 -62: marker 84 100% |==================== [ 84 84 84 84 84 ] GENE1373 744.43 -61: marker 85 100% |==================== [ 85 85 85 85 85 ] GENE1372 747.28 -60: marker 118 100% |==================== [ 118 118 118 118 118 ] GENE12280 750.26 -59: marker 142 60% |============ [ 142 142 142 119 119 ] C34_381-E1 762.59 -58: marker 119 60% |============ [ 119 119 119 142 142 ] GENE12279 774.39 -57: marker 120 100% |==================== [ 120 120 120 120 120 ] GENE12278 780.3 -56: marker 86 100% |==================== [ 86 86 86 86 86 ] GENE1370 780.3 -55: marker 88/123 40% |======== [ 123 123 88 87 88 ] GENE12275 786.02 -54: marker 88 60% |============ [ 88 88 87 88 123 ] GENE1367 788.82 -53: marker 122 60% |============ [ 87 122 121 122 122 ] GENE12276 788.82 -52: marker 87/122 40% |======== [ 122 87 122 123 87 ] GENE1369 788.82 -51: marker 121 80% |================ [ 121 121 123 121 121 ] GENE12277 788.82 -50: marker 32 80% |================ [ 32 32 34 32 32 ] GENE7272 791.59 -49: marker 33 100% |==================== [ 33 33 33 33 33 ] GENE7271 796.87 -48: marker 34 80% |================ [ 34 34 32 34 34 ] GENE7269 805.12 -47: marker 124 100% |==================== [ 124 124 124 124 124 ] GENE12274 813.51 -46: marker 125 100% |==================== [ 125 125 125 125 125 ] GENE12272 821.87 -45: marker 90 100% |==================== [ 90 90 90 90 90 ] GENE1363 824.56 -44: marker 89 100% |==================== [ 89 89 89 89 89 ] GENE1364 830 -43: marker 91 100% |==================== [ 91 91 91 91 91 ] GENE1362 841.01 -42: marker 126 100% |==================== [ 126 126 126 126 126 ] GENE12271 848.87 -41: marker 35 80% |================ [ 35 35 35 127 35 ] GENE7263 902.99 -40: marker 92 100% |==================== [ 92 92 92 92 92 ] GENE1360 908.56 -39: marker 127 80% |================ [ 127 127 127 35 127 ] GENE12270 911.26 -38: marker 36 100% |==================== [ 36 36 36 36 36 ] GENE7262 913.97 -37: marker 93 60% |============ [ 93 93 37 37 93 ] GENE1359 922.24 -36: marker 37 60% |============ [ 37 37 93 93 37 ] GENE7261 924.9 -35: marker 38 100% |==================== [ 38 38 38 38 38 ] GENE7260 927.6 -34: marker 94 100% |==================== [ 94 94 94 94 94 ] GENE1356 930.37 -33: marker 17 100% |==================== [ 17 17 17 17 17 ] GENE7595 936.06 -32: marker 16 60% |============ [ 16 16 16 71 71 ] GENE7597 944.46 -31: marker 114 60% |============ [ 114 114 114 70 70 ] GENE12362 949.93 -30: marker 71 60% |============ [ 71 71 71 69 69 ] GENE1695 967.98 -29: marker 70 60% |============ [ 70 70 70 67 67 ] GENE1696 973.98 -28: marker 69 60% |============ [ 69 69 69 68 68 ] GENE1697 983.02 -27: marker 67 60% |============ [ 67 67 67 114 114 ] GENE1699 991.66 -26: marker 68 60% |============ [ 68 68 68 16 16 ] GENE1698 994.36 -25: marker 15 80% |================ [ 15 15 66 15 15 ] GENE7600 999.8 -24: marker 66 80% |================ [ 66 66 15 66 66 ] GENE1700 999.8 -23: marker 136 100% |==================== [ 136 136 136 136 136 ] C34_EST26B6 1005.28 -22: marker 14 100% |==================== [ 14 14 14 14 14 ] GENE7601 1013.53 -21: marker 13 80% |================ [ 13 13 13 147 13 ] GENE7602 1027.39 -20: marker 147 80% |================ [ 147 147 147 13 147 ] C34_374-I15 1042.02 -19: marker 64 100% |==================== [ 64 64 64 64 64 ] GENE1703 1064.71 -18: marker 65 100% |==================== [ 65 65 65 65 65 ] GENE1702 1067.53 -17: marker 11 60% |============ [ 11 11 12 11 12 ] GENE7604 1072.89 -16: marker 12 60% |============ [ 12 12 11 12 11 ] GENE7603 1072.89 -15: marker 10 100% |==================== [ 10 10 10 10 10 ] GENE7605 1096.66 -14: marker 9 80% |================ [ 9 9 9 9 63 ] GENE7606 1105 -13: marker 139 80% |================ [ 139 139 139 139 62 ] C34_382-G2 1105 -12: marker 63/62 40% |======== [ 62 62 63 63 139 ] GENE1705 1116.76 -11: marker 63/62 40% |======== [ 63 63 62 62 9 ] GENE1706 1122.59 -10: marker 8 100% |==================== [ 8 8 8 8 8 ] GENE7607 1156.62 -9: marker 7 80% |================ [ 7 7 61 7 7 ] GENE7608 1164.65 -8: marker 61 80% |================ [ 61 61 7 61 61 ] GENE1708 1164.65 -7: marker 6 100% |==================== [ 6 6 6 6 6 ] GENE7609 1172.58 -6: marker 60 100% |==================== [ 60 60 60 60 60 ] GENE1709 1175.15 -5: marker 3 100% |==================== [ 3 3 3 3 3 ] GENE7610 1226.5 -4: marker 2 100% |==================== [ 2 2 2 2 2 ] GENE7611 1240.99 -3: marker 1 100% |==================== [ 1 1 1 1 1 ] GENE7612 1250.7 -2: marker 4 100% |==================== [ 4 4 4 4 4 ] GENE1711 1270.95 -1: marker 5 100% |==================== [ 5 5 5 5 5 ] GENE1710 1282.85