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June 24, 2017 , 12h31.

THE CANINE RH10K MAP

Interpreting the map :

The CFA29 RH map is reported in the centromere-telomere orientation.
column 1 - marker position
column 2&3 - marker number Id.
column 4 - consensus %
column 5 - graphic bars
column 6 to 12 - the five maps data
column 7 - marker name
column 8 - cumulated distance in cR


The RH map shows the 5 maps automatically delivered by rh_tsp_map2  
program. Results of the comparison of these five maps is enlighted by  
horizontal bars of variable lengths. When a marker is present on the  
five maps at the same position, the horizontal bar has a maximum length  
and corresponds to mapping positions reaching high confidence and when  
a marker is present in the five maps at different positions, the  
horizontal bar has a shorter length reflecting a lower confidence level  
(at the top, a scale of 0 to 100% reflects the confidence level of the  
position of each marker). A consensus map follows the 5 maps computed  
by rh_tsp_map2. It corresponds to the markers having the best score at  
each position. Marker names of the consensus map are indicated in the  
penultimate column. The rightest column reports the cumulative distance  
between RH markers in centiRay (cR).
==================================================================
canine chromosome29
-135: marker 41      100%   |====================   [ 41  41  41  41  41  ] GENE8688       -0   
-134: marker 82      100%   |====================   [ 82  82  82  82  82  ] GENE2790       25.29
-133: marker 42      60%    |============           [ 83  83  42  42  42  ] GENE8686       39.25
-132: marker 83      60%    |============           [ 42  42  83  83  83  ] GENE2789       47.41
-131: marker 117     100%   |====================   [ 117 117 117 117 117 ] GENE12607      60.95
-130: marker 116     100%   |====================   [ 116 116 116 116 116 ] GENE13026      68.58
-129: marker 45      60%    |============           [ 43  43  45  45  45  ] GENE8683       79.27
-128: marker 81/44   40%    |========               [ 81  81  85  44  44  ] GENE8684       87.56
-127: marker 85/84   40%    |========               [ 84  84  44  85  85  ] GENE2786       95.6 
-126: marker 84      60%    |============           [ 45  45  84  84  84  ] GENE2787       100.8
-125: marker 81      60%    |============           [ 44  44  81  81  81  ] GENE6140       106.16
-124: marker 43      60%    |============           [ 85  85  43  43  43  ] GENE8685       114.8
-123: marker 118     100%   |====================   [ 118 118 118 118 118 ] GENE12606      126.69
-122: marker 86      100%   |====================   [ 86  86  86  86  86  ] GENE2784       137.99
-121: marker 46      100%   |====================   [ 46  46  46  46  46  ] GENE8682       145.87
-120: marker 47      100%   |====================   [ 47  47  47  47  47  ] GENE8680       150.97
-119: marker 48      100%   |====================   [ 48  48  48  48  48  ] GENE8679       156.14
-118: marker 87      100%   |====================   [ 87  87  87  87  87  ] GENE2783       176.96
-117: marker 88      100%   |====================   [ 88  88  88  88  88  ] GENE2782       183.06
-116: marker 130     100%   |====================   [ 130 130 130 130 130 ] C29_416-D20    220.87
-115: marker 131     80%    |================       [ 131 131 89  131 131 ] C29_385-E23    255.3
-114: marker 89      80%    |================       [ 89  89  131 89  89  ] GENE2781       275.55
-113: marker 90      100%   |====================   [ 90  90  90  90  90  ] GENE2779       293.96
-112: marker 49      100%   |====================   [ 49  49  49  49  49  ] GENE8677       305.71
-111: marker 50      100%   |====================   [ 50  50  50  50  50  ] GENE8676       320.72
-110: marker 79      60%    |============           [ 79  79  91  79  91  ] GENE8377       329.41
-109: marker 91      60%    |============           [ 91  91  79  91  79  ] GENE2778       332.27
-108: marker 127     100%   |====================   [ 127 127 127 127 127 ] C29_EST5B10B   348.15
-107: marker 92      100%   |====================   [ 92  92  92  92  92  ] GENE2776       348.15
-106: marker 51      100%   |====================   [ 51  51  51  51  51  ] GENE8674       356.84
-105: marker 52      100%   |====================   [ 52  52  52  52  52  ] GENE8673       390  
-104: marker 94      60%    |============           [ 94  94  94  133 133 ] GENE2772       422.15
-103: marker 56      60%    |============           [ 56  56  56  134 134 ] GENE8667       435.7
-102: marker 55      60%    |============           [ 55  55  55  119 119 ] GENE8668       470.71
-101: marker 53      60%    |============           [ 53  53  53  54  54  ] GENE8672       499.84
-100: marker 54      60%    |============           [ 54  54  54  53  53  ] GENE8671       533.85
-99:  marker 119     60%    |============           [ 119 119 119 55  55  ] GENE12605      539.88
-98:  marker 134     60%    |============           [ 134 134 134 56  56  ] C29_373-C7     558.02
-97:  marker 133     60%    |============           [ 133 133 133 94  94  ] C29_375-C9     558.02
-96:  marker 93      100%   |====================   [ 93  93  93  93  93  ] GENE2773       577.67
-95:  marker 135     100%   |====================   [ 135 135 135 135 135 ] C29_372-E20    627.95
-94:  marker 57      100%   |====================   [ 57  57  57  57  57  ] GENE8664       673.57
-93:  marker 95      100%   |====================   [ 95  95  95  95  95  ] GENE2767       684.57
-92:  marker 96      100%   |====================   [ 96  96  96  96  96  ] GENE2766       707.05
-91:  marker 97      100%   |====================   [ 97  97  97  97  97  ] GENE2765       736.95
-90:  marker 59      100%   |====================   [ 59  59  59  59  59  ] GENE8661       759.83
-89:  marker 98      100%   |====================   [ 98  98  98  98  98  ] GENE2764       786.14
-88:  marker 58      100%   |====================   [ 58  58  58  58  58  ] GENE8662       810.85
-87:  marker 101     100%   |====================   [ 101 101 101 101 101 ] GENE2760       832.92
-86:  marker 63      100%   |====================   [ 63  63  63  63  63  ] GENE8657       838.67
-85:  marker 100     60%    |============           [ 100 100 100 128 128 ] GENE2761       847.12
-84:  marker 114     60%    |============           [ 114 114 114 99  99  ] GENE13130      852.52
-83:  marker 62/100  40%    |========               [ 62  62  61  100 100 ] GENE8658       855.14
-82:  marker 61/114  40%    |========               [ 61  61  62  114 114 ] GENE8659       855.14
-81:  marker 128     60%    |============           [ 128 128 128 62  61  ] C29_417-D2     860.38
-80:  marker 99      60%    |============           [ 99  99  99  61  62  ] GENE2762       862.95
-79:  marker 60      100%   |====================   [ 60  60  60  60  60  ] GENE8660       876.49
-78:  marker 102     100%   |====================   [ 102 102 102 102 102 ] GENE2759       900.59
-77:  marker 64      100%   |====================   [ 64  64  64  64  64  ] GENE8656       918.4
-76:  marker 65      100%   |====================   [ 65  65  65  65  65  ] GENE8655       926.83
-75:  marker 103     100%   |====================   [ 103 103 103 103 103 ] GENE2756       938.43
-74:  marker 129     100%   |====================   [ 129 129 129 129 129 ] C29_416-N2     959.8
-73:  marker 120     100%   |====================   [ 120 120 120 120 120 ] GENE12603      971.78
-72:  marker 66      100%   |====================   [ 66  66  66  66  66  ] GENE8652       984.18
-71:  marker 67      100%   |====================   [ 67  67  67  67  67  ] GENE8649       1007.62
-70:  marker 121     100%   |====================   [ 121 121 121 121 121 ] GENE12602      1026.36
-69:  marker 122     100%   |====================   [ 122 122 122 122 122 ] GENE12601      1054.41
-68:  marker 104     100%   |====================   [ 104 104 104 104 104 ] GENE2751       1063.07
-67:  marker 70      100%   |====================   [ 70  70  70  70  70  ] GENE8645       1084.05
-66:  marker 68      100%   |====================   [ 68  68  68  68  68  ] GENE8648       1114.2
-65:  marker 69      100%   |====================   [ 69  69  69  69  69  ] GENE8647       1134.17
-64:  marker 126     100%   |====================   [ 126 126 126 126 126 ] GENE1205       1142.94
-63:  marker 106     100%   |====================   [ 106 106 106 106 106 ] GENE2749       1145.84
-62:  marker 132     100%   |====================   [ 132 132 132 132 132 ] C29_376-N1     1154.44
-61:  marker 123     100%   |====================   [ 123 123 123 123 123 ] GENE12600      1169.88
-60:  marker 105     100%   |====================   [ 105 105 105 105 105 ] GENE2750       1183.32
-59:  marker 107     100%   |====================   [ 107 107 107 107 107 ] GENE2745       1213.1
-58:  marker 71      60%    |============           [ 71  71  124 71  124 ] GENE8644       1248.91
-57:  marker 124     60%    |============           [ 124 124 71  124 71  ] GENE12599      1248.91
-56:  marker 80      100%   |====================   [ 80  80  80  80  80  ] GENE6235       1254.67
-55:  marker 115     100%   |====================   [ 115 115 115 115 115 ] GENE13129      1272.21
-54:  marker 72      100%   |====================   [ 72  72  72  72  72  ] GENE8642       1280.22
-53:  marker 73      80%    |================       [ 73  109 73  73  73  ] GENE8641       1287.97
-52:  marker 74      60%    |============           [ 109 74  74  74  125 ] GENE8640       1290.4
-51:  marker 74/73   40%    |========               [ 74  73  125 109 74  ] GENE2743       1292.83
-50:  marker 125     60%    |============           [ 125 125 109 125 109 ] GENE12597      1297.94
-49:  marker 108     100%   |====================   [ 108 108 108 108 108 ] GENE2744       1311.6
-48:  marker 110     100%   |====================   [ 110 110 110 110 110 ] GENE2742       1333.93
-47:  marker 111     100%   |====================   [ 111 111 111 111 111 ] GENE2741       1342.67
-46:  marker 75      100%   |====================   [ 75  75  75  75  75  ] GENE8639       1347.67
-45:  marker 76      100%   |====================   [ 76  76  76  76  76  ] GENE8638       1355.3
-44:  marker 78      100%   |====================   [ 78  78  78  78  78  ] GENE8636       1378.3
-43:  marker 77      100%   |====================   [ 77  77  77  77  77  ] GENE8637       1409.23
-42:  marker 113     100%   |====================   [ 113 113 113 113 113 ] GENE2738       1431.7
-41:  marker 112     100%   |====================   [ 112 112 112 112 112 ] GENE2740       1466.01
-40:  marker 21      100%   |====================   [ 21  21  21  21  21  ] GENE2732       1546.83
-39:  marker 17      60%    |============           [ 17  17  17  39  3   ] GENE2737       1626.47
-38:  marker 2       60%    |============           [ 2   2   2   17  17  ] GENE8633       1664.64
-37:  marker 34/2    40%    |========               [ 34  34  1   2   2   ] GENE12596      1672.84
-36:  marker 1       60%    |============           [ 1   1   34  1   34  ] GENE8634       1678.31
-35:  marker 18      60%    |============           [ 18  18  18  34  1   ] GENE2735       1686.63
-34:  marker 35/18   40%    |========               [ 35  35  19  18  18  ] GENE12595      1697.72
-33:  marker 19      80%    |================       [ 19  19  35  19  19  ] GENE2734       1703.1
-32:  marker 39      60%    |============           [ 39  39  39  35  35  ] C29_381-H1     1717.27
-31:  marker 20      80%    |================       [ 20  20  20  20  39  ] GENE2733       1728.35
-30:  marker 3       80%    |================       [ 3   3   3   3   20  ] GENE8630       1733.85
-29:  marker 4       100%   |====================   [ 4   4   4   4   4   ] GENE8629       1745.26
-28:  marker 40      100%   |====================   [ 40  40  40  40  40  ] C29_376-A15    1756.67
-27:  marker 22      100%   |====================   [ 22  22  22  22  22  ] GENE2731       1765.27
-26:  marker 5       100%   |====================   [ 5   5   5   5   5   ] GENE8628       1771.08
-25:  marker 6       60%    |============           [ 6   23  6   23  6   ] GENE8627       1780 
-24:  marker 23      60%    |============           [ 23  6   23  6   23  ] GENE2730       1782.99
-23:  marker 7       100%   |====================   [ 7   7   7   7   7   ] GENE8626       1795.75
-22:  marker 24      100%   |====================   [ 24  24  24  24  24  ] GENE2728       1811.24
-21:  marker 28      60%    |============           [ 27  8   28  28  28  ] GENE8623       1826.37
-20:  marker 25      60%    |============           [ 8   27  25  25  25  ] GENE2727       1841.62
-19:  marker 9       60%    |============           [ 32  32  9   9   9   ] GENE13128      1844.54
-18:  marker 26      60%    |============           [ 36  36  26  26  26  ] GENE2726       1856.66
-17:  marker 36/26   40%    |========               [ 26  26  36  8   36  ] GENE12594      1862.31
-16:  marker 9/8     40%    |========               [ 9   9   8   27  32  ] GENE8622       1865.09
-15:  marker 27/25   40%    |========               [ 25  25  27  32  27  ] GENE2725       1865.09
-14:  marker 28/8    40%    |========               [ 28  28  32  36  8   ] GENE2723       1865.09
-13:  marker 10      100%   |====================   [ 10  10  10  10  10  ] GENE8620       1886.87
-12:  marker 11      100%   |====================   [ 11  11  11  11  11  ] GENE8618       1913.05
-11:  marker 29      80%    |================       [ 29  29  29  12  29  ] GENE2718       1961.86
-10:  marker 12      80%    |================       [ 12  12  12  29  12  ] GENE8616       1978.47
-9:   marker 13      100%   |====================   [ 13  13  13  13  13  ] GENE8615       1997.47
-8:   marker 37      100%   |====================   [ 37  37  37  37  37  ] GENE12593      2008.05
-7:   marker 14      80%    |================       [ 14  14  14  14  30  ] GENE8614       2015.74
-6:   marker 30      80%    |================       [ 30  30  30  30  14  ] GENE2717       2020.86
-5:   marker 38      100%   |====================   [ 38  38  38  38  38  ] C29_385-D19    2039.92
-4:   marker 15      100%   |====================   [ 15  15  15  15  15  ] GENE8613       2058.77
-3:   marker 16      100%   |====================   [ 16  16  16  16  16  ] GENE8611       2085.85
-2:   marker 33      100%   |====================   [ 33  33  33  33  33  ] GENE13127      2092.9
-1:   marker 31      100%   |====================   [ 31  31  31  31  31  ] GENE2714       2110.57