back
April 16, 2024 , 21h36.
Interpreting the map : The CFA26 RH map is reported in the centromere-telomere orientation. column 1 - marker position column 2&3 - marker number Id. column 4 - consensus % column 5 - graphic bars column 6 to 12 - the five maps data column 7 - marker name column 8 - cumulated distance in cR The RH map shows the 5 maps automatically delivered by rh_tsp_map2 program. Results of the comparison of these five maps is enlighted by horizontal bars of variable lengths. When a marker is present on the five maps at the same position, the horizontal bar has a maximum length and corresponds to mapping positions reaching high confidence and when a marker is present in the five maps at different positions, the horizontal bar has a shorter length reflecting a lower confidence level (at the top, a scale of 0 to 100% reflects the confidence level of the position of each marker). A consensus map follows the 5 maps computed by rh_tsp_map2. It corresponds to the markers having the best score at each position. Marker names of the consensus map are indicated in the penultimate column. The rightest column reports the cumulative distance between RH markers in centiRay (cR).==================================================================
-1: marker 7 80% |================ [ 7 7 3 7 7 ] GENE13491 0 -2: marker 1 100% |==================== [ 1 1 1 1 1 ] GENE9155 10.38 -3: marker 3 80% |================ [ 3 3 7 3 3 ] GENE3261 15.43 -4: marker 4 100% |==================== [ 4 4 4 4 4 ] GENE3260 28.99 -5: marker 2 100% |==================== [ 2 2 2 2 2 ] GENE9153 31.59 -6: marker 5 100% |==================== [ 5 5 5 5 5 ] GENE3259 54.42 -7: marker 9 100% |==================== [ 9 9 9 9 9 ] C26_381-E19 62.33 -8: marker 8 100% |==================== [ 8 8 8 8 8 ] GENE13490 73.28 -9: marker 6 100% |==================== [ 6 6 6 6 6 ] GENE3258 81.66 -10: marker 11 60% |============ [ 11 11 11 10 10 ] GENE9089 99.06 -11: marker 12 60% |============ [ 12 12 12 11 11 ] GENE9088 109.97 -12: marker 14 60% |============ [ 14 14 14 12 12 ] GENE13478 117.98 -13: marker 13 100% |==================== [ 13 13 13 13 13 ] GENE3195 120.58 -14: marker 10 60% |============ [ 10 10 10 14 14 ] GENE9151 155.64 -15: marker 16 60% |============ [ 16 16 16 15 15 ] GENE3196 208.61 -16: marker 18 100% |==================== [ 18 18 18 18 18 ] C26_381-G11 211.26 -17: marker 15 60% |============ [ 15 15 15 16 16 ] GENE9091 216.61 -18: marker 19 100% |==================== [ 19 19 19 19 19 ] C26_373-E12 227.46 -19: marker 20 100% |==================== [ 20 20 20 20 20 ] GENE9092 250.79 -20: marker 17 100% |==================== [ 17 17 17 17 17 ] GENE12940 280.53 -21: marker 25 100% |==================== [ 25 25 25 25 25 ] GENE11483 300.2 -22: marker 26 100% |==================== [ 26 26 26 26 26 ] GENE11482 317.6 -23: marker 52 100% |==================== [ 52 52 52 52 52 ] GENE11481 344.81 -24: marker 28 100% |==================== [ 28 28 28 28 28 ] GENE11477 379.97 -25: marker 32 100% |==================== [ 32 32 32 32 32 ] C26_416-J22 394.53 -26: marker 51 100% |==================== [ 51 51 51 51 51 ] GENE826 399.92 -27: marker 27 100% |==================== [ 27 27 27 27 27 ] GENE11478 411.37 -28: marker 31 100% |==================== [ 31 31 31 31 31 ] GENE11471 437.75 -29: marker 24 100% |==================== [ 24 24 24 24 24 ] GENE1849 445.59 -30: marker 23 60% |============ [ 30 30 23 23 23 ] GENE5587 450.77 -31: marker 30 60% |============ [ 23 23 30 30 30 ] GENE11472 458.33 -32: marker 22 100% |==================== [ 22 22 22 22 22 ] GENE5588 468.5 -33: marker 29 100% |==================== [ 29 29 29 29 29 ] GENE11473 470.95 -34: marker 21 100% |==================== [ 21 21 21 21 21 ] GENE5589 475.95 -35: marker 37 100% |==================== [ 37 37 37 37 37 ] GENE5599 503.53 -36: marker 39 60% |============ [ 39 39 39 46 46 ] GENE5586 534.21 -37: marker 48 60% |============ [ 48 48 48 35 35 ] GENE11476 544.75 -38: marker 35 60% |============ [ 35 35 35 39 39 ] GENE5602 555.18 -39: marker 46 60% |============ [ 46 46 46 48 48 ] GENE11486 560.09 -40: marker 36 80% |================ [ 36 36 36 45 36 ] GENE5600 570.54 -41: marker 45 80% |================ [ 45 45 45 36 45 ] GENE11487 573.09 -42: marker 44 100% |==================== [ 44 44 44 44 44 ] GENE11489 589.28 -43: marker 34 100% |==================== [ 34 34 34 34 34 ] GENE5604 591.9 -44: marker 38 100% |==================== [ 38 38 38 38 38 ] GENE5607 600 -45: marker 41 100% |==================== [ 41 41 41 41 41 ] GENE11492 605.03 -46: marker 42 100% |==================== [ 42 42 42 42 42 ] GENE11491 615.18 -47: marker 33 100% |==================== [ 33 33 33 33 33 ] GENE5606 622.61 -48: marker 43 100% |==================== [ 43 43 43 43 43 ] GENE11490 627.56 -49: marker 49 100% |==================== [ 49 49 49 49 49 ] C26_381-O6 643.61 -50: marker 40 100% |==================== [ 40 40 40 40 40 ] GENE13433 648.78 -51: marker 50 100% |==================== [ 50 50 50 50 50 ] C26_381-B24 662.05 -52: marker 47 100% |==================== [ 47 47 47 47 47 ] GENE11484 664.46 -172: marker 172 60% |============ [ 172 172 172 167 167 ] GENE5610 764.46 -171: marker 167 60% |============ [ 167 167 167 172 172 ] GENE5620 813.28 -170: marker 165/156 40% |======== [ 165 165 156 146 149 ] GENE11501 853.97 -169: marker 164 60% |============ [ 164 164 164 148 146 ] GENE11503 869.4 -168: marker 160/165 40% |======== [ 160 160 165 149 148 ] GENE11509 882.27 -167: marker 154/151 40% |======== [ 154 154 162 151 151 ] GENE5624 884.76 -166: marker 162/150 40% |======== [ 162 162 154 150 150 ] GENE11507 889.9 -165: marker 169/153 40% |======== [ 153 153 160 169 169 ] GENE5625 900.55 -164: marker 170/158 40% |======== [ 158 158 157 170 170 ] GENE11511 905.59 -163: marker 168 60% |============ [ 168 168 168 165 165 ] GENE5628 910.52 -162: marker 164/157 40% |======== [ 157 157 158 164 164 ] GENE11512 920.83 -161: marker 161/156 40% |======== [ 161 161 153 156 156 ] GENE11508 931.5 -160: marker 152 60% |============ [ 152 152 152 154 159 ] GENE5627 936.7 -159: marker 159 60% |============ [ 159 159 159 162 152 ] GENE11510 936.7 -158: marker 156/161 40% |======== [ 156 156 161 160 153 ] GENE13436 947.3 -157: marker 163 60% |============ [ 163 163 163 158 158 ] GENE11505 971.13 -156: marker 155 60% |============ [ 155 155 155 168 168 ] GENE5618 996.44 -155: marker 166 60% |============ [ 166 166 166 157 157 ] GENE5622 1027.62 -154: marker 171 60% |============ [ 171 171 171 153 160 ] GENE11500 1060.23 -153: marker 170 60% |============ [ 170 170 170 159 162 ] GENE5615 1114.37 -152: marker 169 60% |============ [ 169 169 169 152 154 ] GENE13435 1138.6 -151: marker 150 60% |============ [ 150 150 150 161 161 ] GENE5613 1151.67 -150: marker 151 60% |============ [ 151 151 151 163 163 ] GENE11496 1161.78 -149: marker 149 60% |============ [ 149 149 149 155 155 ] GENE11495 1174.75 -148: marker 148 60% |============ [ 148 148 148 166 166 ] GENE5609 1185.63 -147: marker 146 60% |============ [ 146 146 146 171 171 ] GENE13434 1199.16 -146: marker 147 60% |============ [ 147 147 147 112 112 ] GENE11493 1209.95 -145: marker 112 60% |============ [ 112 112 112 147 147 ] GENE11494 1221.24 -144: marker 94 60% |============ [ 94 94 94 95 95 ] GENE9830 1245.08 -143: marker 95 60% |============ [ 95 95 95 113 113 ] GENE5608 1259 -142: marker 113 60% |============ [ 113 113 113 94 94 ] C26_416-D16 1266.88 -141: marker 87 60% |============ [ 87 87 87 105 105 ] GENE9838 1286.08 -140: marker 88/87 40% |======== [ 88 88 91 87 87 ] GENE9833 1288.74 -139: marker 88 60% |============ [ 91 91 88 88 88 ] GENE9837 1288.74 -138: marker 106 60% |============ [ 106 106 106 91 91 ] GENE13708 1288.74 -137: marker 105 60% |============ [ 105 105 105 106 106 ] GENE13709 1288.74 -136: marker 92 100% |==================== [ 92 92 92 92 92 ] GENE9832 1291.52 -135: marker 107 100% |==================== [ 107 107 107 107 107 ] GENE13707 1294.21 -134: marker 108 100% |==================== [ 108 108 108 108 108 ] GENE13706 1296.91 -133: marker 109 100% |==================== [ 109 109 109 109 109 ] GENE13705 1296.91 -132: marker 111 100% |==================== [ 111 111 111 111 111 ] GENE13233 1296.91 -131: marker 93/104 40% |======== [ 93 104 93 89 104 ] GENE13710 1296.91 -130: marker 93/104 40% |======== [ 104 93 104 93 89 ] GENE9831 1296.91 -129: marker 89 60% |============ [ 89 89 89 104 93 ] GENE9835 1302.35 -128: marker 90 100% |==================== [ 90 90 90 90 90 ] GENE9834 1310.7 -127: marker 103 100% |==================== [ 103 103 103 103 103 ] GENE3942 1313.45 -126: marker 102 100% |==================== [ 102 102 102 102 102 ] GENE3943 1322.26 -125: marker 86 100% |==================== [ 86 86 86 86 86 ] GENE9839 1331.23 -124: marker 81 100% |==================== [ 81 81 81 81 81 ] GENE9870 1337.07 -123: marker 82 80% |================ [ 82 82 82 98 82 ] GENE9869 1337.07 -122: marker 98 60% |============ [ 98 98 98 82 85 ] GENE3980 1337.07 -121: marker 96 80% |================ [ 96 96 96 85 96 ] GENE3982 1339.91 -120: marker 97 100% |==================== [ 97 97 97 97 97 ] GENE3981 1339.91 -119: marker 85 60% |============ [ 85 85 85 96 98 ] GENE9871 1342.71 -118: marker 99 100% |==================== [ 99 99 99 99 99 ] GENE3978 1365.13 -117: marker 110 60% |============ [ 110 110 83 83 110 ] GENE13234 1377.42 -116: marker 83 60% |============ [ 83 83 110 110 83 ] GENE9866 1377.42 -115: marker 84 100% |==================== [ 84 84 84 84 84 ] GENE9865 1380.27 -114: marker 100 100% |==================== [ 100 100 100 100 100 ] GENE3977 1388.91 -113: marker 80 100% |==================== [ 80 80 80 80 80 ] GENE13721 1394.35 -112: marker 101 100% |==================== [ 101 101 101 101 101 ] GENE3976 1399.8 -111: marker 79 100% |==================== [ 79 79 79 79 79 ] GENE9864 1402.55 -110: marker 116 100% |==================== [ 116 116 116 116 116 ] GENE3974 1427.8 -109: marker 115 100% |==================== [ 115 115 115 115 115 ] GENE9863 1452.54 -108: marker 117 100% |==================== [ 117 117 117 117 117 ] GENE9862 1463.93 -107: marker 118 100% |==================== [ 118 118 118 118 118 ] GENE9861 1472.57 -106: marker 122 100% |==================== [ 122 122 122 122 122 ] GENE3972 1478.2 -105: marker 119 100% |==================== [ 119 119 119 119 119 ] GENE9860 1489.4 -104: marker 131 100% |==================== [ 131 131 131 131 131 ] C26_380-B10 1492.03 -103: marker 120 100% |==================== [ 120 120 120 120 120 ] GENE9859 1497.39 -102: marker 114 100% |==================== [ 114 114 114 114 114 ] GENE9868 1512.25 -101: marker 123 80% |================ [ 123 123 123 123 127 ] GENE3970 1524.06 -100: marker 127 80% |================ [ 127 127 127 127 123 ] GENE13720 1526.87 -99: marker 128 100% |==================== [ 128 128 128 128 128 ] GENE13719 1535.55 -98: marker 121 80% |================ [ 121 121 121 121 124 ] GENE9857 1552.87 -97: marker 124 80% |================ [ 124 124 124 124 121 ] GENE3969 1563.74 -96: marker 130 100% |==================== [ 130 130 130 130 130 ] GENE13717 1574.61 -95: marker 129 100% |==================== [ 129 129 129 129 129 ] GENE13718 1577.3 -94: marker 125 100% |==================== [ 125 125 125 125 125 ] GENE3967 1591.71 -93: marker 134 100% |==================== [ 134 134 134 134 134 ] GENE3965 1609.33 -92: marker 140 100% |==================== [ 140 140 140 140 140 ] GENE3964 1621.37 -91: marker 126 80% |================ [ 126 126 126 126 141 ] GENE3963 1627.58 -90: marker 141 80% |================ [ 141 141 141 141 126 ] GENE3961 1644.59 -89: marker 137 80% |================ [ 137 137 137 135 137 ] GENE13714 1671.65 -88: marker 135 60% |============ [ 135 135 135 137 136 ] GENE3962 1680.29 -87: marker 132 60% |============ [ 132 132 132 136 138 ] GENE9851 1683.03 -86: marker 136 60% |============ [ 136 136 136 138 132 ] GENE13715 1691.38 -85: marker 138 60% |============ [ 138 138 138 132 135 ] GENE9850 1702.78 -84: marker 133 80% |================ [ 133 133 133 133 142 ] GENE9849 1720.1 -83: marker 142 80% |================ [ 142 142 142 142 133 ] C26_375-L7 1728.49 -82: marker 73 100% |==================== [ 73 73 73 73 73 ] GENE9847 1742.9 -81: marker 78 100% |==================== [ 78 78 78 78 78 ] GENE3960 1751 -80: marker 139 100% |==================== [ 139 139 139 139 139 ] GENE9846 1756.36 -79: marker 74 100% |==================== [ 74 74 74 74 74 ] GENE9845 1773.41 -78: marker 76 60% |============ [ 77 77 76 76 76 ] GENE3957 1781.94 -77: marker 77 60% |============ [ 76 76 77 77 77 ] GENE13713 1808.46 -76: marker 144 100% |==================== [ 144 144 144 144 144 ] GENE9844 1848.6 -75: marker 145 100% |==================== [ 145 145 145 145 145 ] GENE3955 1873.39 -74: marker 143 100% |==================== [ 143 143 143 143 143 ] GENE13712 1893.93 -73: marker 75 100% |==================== [ 75 75 75 75 75 ] GENE9843 1912.23 -72: marker 65 100% |==================== [ 65 65 65 65 65 ] GENE3954 1929.02 -71: marker 40 100% |==================== [ 40 40 40 40 40 ] GENE9842 1939.89 -70: marker 50 100% |==================== [ 50 50 50 50 50 ] GENE3953 1948.24 -69: marker 72 60% |============ [ 72 72 72 49 49 ] GENE9872 1997.92 -68: marker 60 60% |============ [ 60 60 60 66 66 ] GENE9875 2042.23 -67: marker 61 60% |============ [ 61 61 61 52 52 ] GENE9873 2055.56 -66: marker 59 60% |============ [ 59 59 59 41 42 ] GENE9876 2058.09 -65: marker 41 60% |============ [ 41 41 42 42 41 ] GENE9841 2063.31 -64: marker 72/42 40% |======== [ 42 42 41 72 72 ] GENE9840 2063.31 -63: marker 52 60% |============ [ 52 52 52 61 60 ] GENE13711 2068.78 -62: marker 66 60% |============ [ 66 66 66 60 61 ] GENE3952 2080.26 -61: marker 49 60% |============ [ 49 49 49 59 59 ] GENE3983 2095.12 -60: marker 64 100% |==================== [ 64 64 64 64 64 ] GENE3984 2113.07 -59: marker 48 100% |==================== [ 48 48 48 48 48 ] GENE3987 2126.95 -58: marker 70 100% |==================== [ 70 70 70 70 70 ] GENE3986 2150.79 -57: marker 71 100% |==================== [ 71 71 71 71 71 ] GENE3985 2156.42 -56: marker 67 60% |============ [ 67 69 67 69 67 ] GENE13722 2173.46 -55: marker 69 60% |============ [ 69 67 69 67 69 ] GENE9874 2178.68 -54: marker 57 100% |==================== [ 57 57 57 57 57 ] GENE9878 2183.9 -53: marker 58 100% |==================== [ 58 58 58 58 58 ] GENE9877 2189.18 -52: marker 63 100% |==================== [ 63 63 63 63 63 ] GENE3988 2200.58 -51: marker 47 100% |==================== [ 47 47 47 47 47 ] GENE3991 2212.62 -50: marker 46 100% |==================== [ 46 46 46 46 46 ] GENE3992 2218.57 -49: marker 39 100% |==================== [ 39 39 39 39 39 ] GENE9880 2227.54 -48: marker 38 100% |==================== [ 38 38 38 38 38 ] GENE9882 2233.27 -47: marker 45 100% |==================== [ 45 45 45 45 45 ] GENE3993 2238.9 -46: marker 54 100% |==================== [ 54 54 54 54 54 ] C26_376-J15 2244.43 -45: marker 55 80% |================ [ 55 55 55 55 56 ] GENE9881 2249.79 -44: marker 56 80% |================ [ 56 56 56 56 55 ] GENE9879 2263.29 -43: marker 51 100% |==================== [ 51 51 51 51 51 ] GENE13723 2280.07 -42: marker 37 100% |==================== [ 37 37 37 37 37 ] GENE9884 2282.82 -41: marker 53 100% |==================== [ 53 53 53 53 53 ] GENE12046 2288.97 -40: marker 44 100% |==================== [ 44 44 44 44 44 ] GENE3997 2306.31 -39: marker 68 100% |==================== [ 68 68 68 68 68 ] GENE3994 2324.32 -38: marker 62 100% |==================== [ 62 62 62 62 62 ] GENE3995 2338.63 -37: marker 43 100% |==================== [ 43 43 43 43 43 ] GENE3998 2359.18 -36: marker 36 100% |==================== [ 36 36 36 36 36 ] GENE9886 2374.32 -35: marker 28 60% |============ [ 28 28 28 33 33 ] GENE9887 2392.27 -34: marker 32 60% |============ [ 32 32 32 35 35 ] GENE3999 2397.9 -33: marker 27 60% |============ [ 27 33 33 27 27 ] GENE9888 2403.34 -32: marker 28/27 40% |======== [ 33 27 27 28 28 ] GENE3996 2403.34 -31: marker 35 60% |============ [ 35 35 35 32 32 ] GENE13724 2408.63 -30: marker 34 60% |============ [ 34 34 34 19 31 ] GENE13725 2425.17 -29: marker 31 60% |============ [ 31 31 31 22 34 ] GENE4000 2433.27 -28: marker 30 100% |==================== [ 30 30 30 30 30 ] GENE4001 2438.63 -27: marker 22 80% |================ [ 22 22 22 31 22 ] GENE4003 2443.92 -26: marker 19 80% |================ [ 19 19 19 34 19 ] GENE9891 2449.28 -25: marker 23 100% |==================== [ 23 23 23 23 23 ] GENE13726 2460.16 -24: marker 18 100% |==================== [ 18 18 18 18 18 ] GENE9892 2479.35 -23: marker 29 100% |==================== [ 29 29 29 29 29 ] GENE4004 2517.67 -22: marker 20 100% |==================== [ 20 20 20 20 20 ] GENE4007 2574.23 -21: marker 21 100% |==================== [ 21 21 21 21 21 ] GENE4006 2590.34 -20: marker 24 60% |============ [ 26 26 24 24 24 ] GENE13235 2601.25 -19: marker 26 60% |============ [ 24 24 26 26 26 ] C26_372-I14 2606.62 -18: marker 25 100% |==================== [ 25 25 25 25 25 ] C26_372-I7 2611.79 -17: marker 17 100% |==================== [ 17 17 17 17 17 ] GENE9894 2619.43 -16: marker 14 80% |================ [ 14 14 8 14 14 ] GENE13729 2645.53 -15: marker 8 80% |================ [ 8 8 14 8 8 ] GENE4011 2645.53 -14: marker 15 100% |==================== [ 15 15 15 15 15 ] GENE13728 2647.82 -13: marker 16 100% |==================== [ 16 16 16 16 16 ] GENE13727 2650.11 -12: marker 11 100% |==================== [ 11 11 11 11 11 ] GENE4008 2659.72 -11: marker 10 100% |==================== [ 10 10 10 10 10 ] GENE4009 2669.44 -10: marker 9 100% |==================== [ 9 9 9 9 9 ] GENE4010 2674.19 -9: marker 7 100% |==================== [ 7 7 7 7 7 ] GENE4013 2689.14 -8: marker 13 100% |==================== [ 13 13 13 13 13 ] GENE13730 2703.97 -7: marker 4 80% |================ [ 4 4 4 4 12 ] GENE4016 2716.07 -6: marker 12 80% |================ [ 12 12 12 12 4 ] GENE13731 2723.16 -5: marker 3 100% |==================== [ 3 3 3 3 3 ] GENE9901 2732.74 -4: marker 2 100% |==================== [ 2 2 2 2 2 ] GENE9903 2737.38 -3: marker 1 100% |==================== [ 1 1 1 1 1 ] GENE9904 2744.45 -2: marker 5 100% |==================== [ 5 5 5 5 5 ] GENE4015 2756.64 -1: marker 6 100% |==================== [ 6 6 6 6 6 ] GENE4014 2784.11