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May 30, 2023 , 20h03.
Interpreting the map : The CFA24 RH map is reported in the centromere-telomere orientation. column 1 - marker position column 2&3 - marker number Id. column 4 - consensus % column 5 - graphic bars column 6 to 12 - the five maps data column 7 - marker name column 8 - cumulated distance in cR The RH map shows the 5 maps automatically delivered by rh_tsp_map2 program. Results of the comparison of these five maps is enlighted by horizontal bars of variable lengths. When a marker is present on the five maps at the same position, the horizontal bar has a maximum length and corresponds to mapping positions reaching high confidence and when a marker is present in the five maps at different positions, the horizontal bar has a shorter length reflecting a lower confidence level (at the top, a scale of 0 to 100% reflects the confidence level of the position of each marker). A consensus map follows the 5 maps computed by rh_tsp_map2. It corresponds to the markers having the best score at each position. Marker names of the consensus map are indicated in the penultimate column. The rightest column reports the cumulative distance between RH markers in centiRay (cR).==================================================================
-1: marker 3/115 40% |======== [ 115 115 1 3 3 ] GENE5512 0 -2: marker 123 80% |================ [ 123 123 129 123 123 ] GENE11405 0 -3: marker 121/115 40% |======== [ 121 121 125 115 115 ] GENE12847 11.27 -4: marker 122/121 40% |======== [ 122 122 128 121 121 ] GENE11407 16.95 -5: marker 124/122 40% |======== [ 124 124 127 122 122 ] GENE11406 22.53 -6: marker 3/124 40% |======== [ 3 3 126 124 124 ] GENE11404 39.7 -7: marker 2 100% |==================== [ 2 2 2 2 2 ] GENE5515 56.62 -8: marker 126 80% |================ [ 126 126 124 126 126 ] GENE11396 59.27 -9: marker 127 80% |================ [ 127 127 122 127 127 ] GENE11395 62.05 -10: marker 128 80% |================ [ 128 128 121 128 128 ] GENE11394 62.05 -11: marker 125 80% |================ [ 125 125 123 125 125 ] GENE11397 70.91 -12: marker 129 80% |================ [ 129 129 115 129 129 ] GENE11393 86.87 -13: marker 1 80% |================ [ 1 1 3 1 1 ] GENE5519 126.07 -14: marker 133 80% |================ [ 133 133 8 133 133 ] GENE11388 147.65 -15: marker 5 80% |================ [ 5 5 7 5 5 ] GENE5506 159.26 -16: marker 130 80% |================ [ 130 130 132 130 130 ] GENE11392 167.82 -17: marker 6 60% |============ [ 6 6 131 4 6 ] GENE5505 173.64 -18: marker 104 100% |==================== [ 104 104 104 104 104 ] GENE13418 173.64 -19: marker 6/131 40% |======== [ 131 131 6 6 4 ] GENE11390 176.35 -20: marker 4 60% |============ [ 4 4 4 131 131 ] GENE5507 187.06 -21: marker 132 80% |================ [ 132 132 130 132 132 ] GENE11389 203.36 -22: marker 7 80% |================ [ 7 7 5 7 7 ] GENE5503 205.88 -23: marker 8 80% |================ [ 8 8 133 8 8 ] GENE5502 216.45 -24: marker 10 80% |================ [ 10 10 134 10 10 ] GENE5497 242.97 -25: marker 9 80% |================ [ 9 9 139 9 9 ] GENE5499 251.2 -26: marker 135 80% |================ [ 135 135 138 135 135 ] GENE11384 262.23 -27: marker 136 80% |================ [ 136 136 11 136 136 ] GENE11383 267.52 -28: marker 137 80% |================ [ 137 137 15 137 137 ] GENE11382 272.81 -29: marker 105 80% |================ [ 105 105 10 105 105 ] GENE13416 284.02 -30: marker 12 60% |============ [ 12 12 9 12 229 ] GENE5495 286.77 -31: marker 229/15 40% |======== [ 229 229 135 15 12 ] C24_381-N17 292.41 -32: marker 139/15 40% |======== [ 139 139 136 11 15 ] GENE11378 333.73 -33: marker 138/137 40% |======== [ 138 138 137 134 11 ] GENE11379 333.73 -34: marker 134 60% |============ [ 134 134 105 138 134 ] GENE11385 349.1 -35: marker 11/139 40% |======== [ 11 11 12 139 138 ] GENE5496 391.75 -36: marker 229/15 40% |======== [ 15 15 229 229 139 ] GENE5492 413.98 -37: marker 13 100% |==================== [ 13 13 13 13 13 ] GENE5494 426.05 -38: marker 14 100% |==================== [ 14 14 14 14 14 ] GENE5493 432.06 -39: marker 140 100% |==================== [ 140 140 140 140 140 ] GENE11377 440.92 -40: marker 16 100% |==================== [ 16 16 16 16 16 ] GENE5491 455.63 -41: marker 141 100% |==================== [ 141 141 141 141 141 ] GENE11376 467.51 -42: marker 142 100% |==================== [ 142 142 142 142 142 ] GENE11375 510.33 -43: marker 17 100% |==================== [ 17 17 17 17 17 ] GENE5489 523.03 -44: marker 114 100% |==================== [ 114 114 114 114 114 ] GENE13087 538.88 -45: marker 143 80% |================ [ 143 143 143 145 143 ] GENE11373 576.78 -46: marker 146 80% |================ [ 146 146 146 143 146 ] GENE11370 583.98 -47: marker 145 80% |================ [ 145 145 145 146 145 ] GENE11371 583.98 -48: marker 20 100% |==================== [ 20 20 20 20 20 ] GENE5484 590.54 -49: marker 19 80% |================ [ 19 19 19 19 144 ] GENE5485 596.95 -50: marker 144 60% |============ [ 144 144 144 18 18 ] GENE11372 596.95 -51: marker 18 60% |============ [ 18 18 18 144 19 ] GENE5487 600.06 -52: marker 106 100% |==================== [ 106 106 106 106 106 ] GENE13414 613.9 -53: marker 21 80% |================ [ 227 21 21 21 21 ] GENE5483 624.23 -54: marker 22 80% |================ [ 21 22 22 22 22 ] GENE5481 634.11 -55: marker 227/22 40% |======== [ 22 227 147 148 227 ] C24_382-K3 644.25 -56: marker 227/148 40% |======== [ 147 148 227 227 148 ] GENE11367 647.6 -57: marker 147 60% |============ [ 148 147 148 147 147 ] GENE11368 650.95 -58: marker 23 100% |==================== [ 23 23 23 23 23 ] GENE5480 657.7 -59: marker 149 100% |==================== [ 149 149 149 149 149 ] GENE11365 664.25 -60: marker 116 100% |==================== [ 116 116 116 116 116 ] GENE12844 674.2 -61: marker 150 100% |==================== [ 150 150 150 150 150 ] GENE11362 681.06 -62: marker 151 80% |================ [ 151 151 151 151 117 ] GENE11361 687.91 -63: marker 117 80% |================ [ 117 117 117 117 151 ] GENE12843 694.46 -64: marker 107 100% |==================== [ 107 107 107 107 107 ] GENE13413 717.17 -65: marker 24 100% |==================== [ 24 24 24 24 24 ] GENE5476 756.43 -66: marker 118 60% |============ [ 118 118 159 118 159 ] GENE12842 795.67 -67: marker 25 60% |============ [ 25 25 158 25 158 ] GENE5474 814.99 -68: marker 152 60% |============ [ 152 152 29 152 29 ] GENE11360 833.08 -69: marker 153 60% |============ [ 153 153 30 153 30 ] GENE11358 849.71 -70: marker 26 60% |============ [ 26 26 34 26 34 ] GENE5472 855.77 -71: marker 32/108 40% |======== [ 108 108 32 27 32 ] GENE5465 861.96 -72: marker 28 60% |============ [ 28 28 33 28 33 ] GENE5470 865.09 -73: marker 27/157 40% |======== [ 27 27 157 108 157 ] GENE11350 868.21 -74: marker 154 60% |============ [ 154 154 160 154 160 ] GENE11357 884.84 -75: marker 155 60% |============ [ 155 155 109 155 109 ] GENE11355 894.98 -76: marker 31 60% |============ [ 31 31 156 31 156 ] GENE5467 906.18 -77: marker 31/158 40% |======== [ 158 158 31 159 31 ] GENE11349 927.32 -78: marker 159/118 40% |======== [ 159 159 118 158 118 ] GENE11348 935.93 -79: marker 29 60% |============ [ 29 29 25 29 25 ] GENE5469 983.37 -80: marker 30 60% |============ [ 30 30 152 30 152 ] GENE5468 1014.85 -81: marker 156/153 40% |======== [ 156 156 153 32 153 ] GENE11352 1037.82 -82: marker 26/109 40% |======== [ 109 109 26 34 26 ] GENE13411 1047.22 -83: marker 157/108 40% |======== [ 157 157 108 160 108 ] GENE13412 1056.22 -84: marker 33/28 40% |======== [ 33 33 28 157 28 ] GENE5464 1061.96 -85: marker 32/27 40% |======== [ 32 32 27 33 27 ] GENE5471 1070.62 -86: marker 34/154 40% |======== [ 34 34 154 109 154 ] GENE5463 1079.12 -87: marker 160/155 40% |======== [ 160 160 155 156 155 ] GENE11346 1096.43 -88: marker 161 60% |============ [ 35 35 161 161 161 ] GENE11344 1116.77 -89: marker 36/163 40% |======== [ 36 36 163 162 163 ] GENE11342 1125.17 -90: marker 37/162 40% |======== [ 37 37 162 36 162 ] GENE11343 1127.9 -91: marker 38/36 40% |======== [ 38 38 36 35 36 ] GENE5459 1133.35 -92: marker 39/35 40% |======== [ 39 39 35 37 35 ] GENE5460 1138.89 -93: marker 37/163 40% |======== [ 163 163 37 38 37 ] GENE5458 1151.26 -94: marker 38/162 40% |======== [ 162 162 38 39 38 ] GENE5457 1167.54 -95: marker 39/161 40% |======== [ 161 161 39 163 39 ] GENE5456 1183.87 -96: marker 41 60% |============ [ 41 41 40 41 40 ] GENE5454 1224.98 -97: marker 42 60% |============ [ 42 42 226 42 226 ] GENE5453 1232.02 -98: marker 165/164 40% |======== [ 165 165 164 166 164 ] GENE11339 1245.21 -99: marker 166 80% |================ [ 166 166 166 165 166 ] GENE11338 1245.21 -100: marker 164 60% |============ [ 164 164 165 164 165 ] GENE11340 1251.18 -101: marker 226 60% |============ [ 226 226 42 226 42 ] C24_416-F2 1269.88 -102: marker 40 60% |============ [ 40 40 41 40 41 ] GENE5455 1285.05 -103: marker 47 60% |============ [ 47 47 167 47 167 ] GENE5446 1328.28 -104: marker 170 60% |============ [ 170 170 168 170 169 ] GENE11333 1331.38 -105: marker 169 60% |============ [ 169 169 170 169 170 ] GENE11334 1331.38 -106: marker 167 60% |============ [ 167 167 169 167 47 ] GENE11337 1340.81 -107: marker 168 80% |================ [ 168 168 47 168 168 ] GENE11336 1347.27 -108: marker 46 100% |==================== [ 46 46 46 46 46 ] GENE5448 1350.48 -109: marker 43 100% |==================== [ 43 43 43 43 43 ] GENE5451 1363.11 -110: marker 44 100% |==================== [ 44 44 44 44 44 ] GENE5450 1368.55 -111: marker 45 100% |==================== [ 45 45 45 45 45 ] GENE5449 1382.44 -112: marker 49 100% |==================== [ 49 49 49 49 49 ] GENE5443 1400.27 -113: marker 48 100% |==================== [ 48 48 48 48 48 ] GENE5444 1415.32 -114: marker 172 100% |==================== [ 172 172 172 172 172 ] GENE11327 1434.17 -115: marker 173 80% |================ [ 173 173 173 173 233 ] GENE11326 1440.26 -116: marker 233 80% |================ [ 233 233 233 233 173 ] C24_375-K22 1443.3 -117: marker 174 100% |==================== [ 174 174 174 174 174 ] GENE11325 1455.9 -118: marker 51 80% |================ [ 51 51 51 50 51 ] GENE5438 1474.89 -119: marker 50 80% |================ [ 50 50 50 51 50 ] GENE5439 1487.14 -120: marker 175 100% |==================== [ 175 175 175 175 175 ] GENE11324 1499.46 -121: marker 230 100% |==================== [ 230 230 230 230 230 ] C24_381-L3 1509.12 -122: marker 176 100% |==================== [ 176 176 176 176 176 ] GENE11322 1526 -123: marker 52 100% |==================== [ 52 52 52 52 52 ] GENE5436 1555.04 -124: marker 53 100% |==================== [ 53 53 53 53 53 ] GENE5433 1581.62 -125: marker 177 60% |============ [ 177 177 177 102 102 ] GENE11318 1614.1 -126: marker 179 60% |============ [ 179 179 179 236 236 ] GENE11313 1623.17 -127: marker 102 60% |============ [ 102 102 102 178 178 ] GENE1443 1626.04 -128: marker 178 60% |============ [ 178 178 178 179 55 ] GENE11316 1628.79 -129: marker 236 60% |============ [ 236 236 236 177 56 ] C24_282-G7 1634.28 -130: marker 55 60% |============ [ 55 55 55 54 54 ] GENE5430 1648.49 -131: marker 56 80% |================ [ 56 56 56 56 59 ] GENE5429 1653.94 -132: marker 54 60% |============ [ 54 54 54 55 57 ] GENE5432 1662.29 -133: marker 59 80% |================ [ 59 59 59 59 181 ] GENE5423 1689.7 -134: marker 57 80% |================ [ 57 57 57 57 180 ] GENE5426 1704.11 -135: marker 181 80% |================ [ 181 181 181 181 183 ] GENE11311 1715.98 -136: marker 180 80% |================ [ 180 180 180 180 60 ] GENE11312 1721.9 -137: marker 183 80% |================ [ 183 183 183 183 184 ] GENE11308 1727.53 -138: marker 60 80% |================ [ 60 60 60 60 182 ] GENE5422 1736.43 -139: marker 184 80% |================ [ 184 184 184 184 179 ] GENE11307 1749.22 -140: marker 182 80% |================ [ 182 182 182 182 177 ] GENE11309 1765.44 -141: marker 58 100% |==================== [ 58 58 58 58 58 ] GENE5424 1774.77 -142: marker 188 100% |==================== [ 188 188 188 188 188 ] GENE11300 1799.91 -143: marker 65 60% |============ [ 99 99 65 65 65 ] GENE5415 1821.1 -144: marker 189 60% |============ [ 98 98 189 189 189 ] GENE11298 1830.83 -145: marker 224 60% |============ [ 221 221 224 224 224 ] GENE11240 1836.85 -146: marker 223/220 40% |======== [ 220 220 222 223 223 ] GENE11242 1839.65 -147: marker 97/64 40% |======== [ 97 97 101 64 64 ] GENE5357 1842.5 -148: marker 100 60% |============ [ 100 100 100 63 63 ] GENE5354 1848.24 -149: marker 62/222 40% |======== [ 222 222 97 62 62 ] GENE11239 1853.88 -150: marker 61/101 40% |======== [ 101 101 220 61 61 ] GENE5353 1853.88 -151: marker 185/120 40% |======== [ 120 120 221 185 185 ] GENE11306 1865.95 -152: marker 187/186 40% |======== [ 187 187 98 186 186 ] GENE11303 1881.12 -153: marker 187/186 40% |======== [ 186 186 99 187 187 ] GENE11304 1895.71 -154: marker 185/120 40% |======== [ 185 185 219 120 120 ] GENE12839 1914.02 -155: marker 61/221 40% |======== [ 61 61 120 219 221 ] GENE5420 1933.14 -156: marker 62/97 40% |======== [ 62 62 187 97 101 ] GENE5419 1969.78 -157: marker 63/222 40% |======== [ 63 63 186 100 222 ] GENE5418 1996 -158: marker 64/185 40% |======== [ 64 64 185 101 100 ] GENE5417 2012.08 -159: marker 223/97 40% |======== [ 223 223 61 222 97 ] GENE11238 2050.09 -160: marker 224/62 40% |======== [ 224 224 62 221 220 ] GENE11237 2077.63 -161: marker 189/98 40% |======== [ 189 189 63 220 98 ] GENE5356 2083.89 -162: marker 65/99 40% |======== [ 65 65 64 98 99 ] GENE5355 2096.31 -163: marker 219 60% |============ [ 219 219 223 99 219 ] GENE11243 2118.92 -164: marker 217 100% |==================== [ 217 217 217 217 217 ] GENE11246 2156.52 -165: marker 96 100% |==================== [ 96 96 96 96 96 ] GENE5361 2174.21 -166: marker 218 100% |==================== [ 218 218 218 218 218 ] GENE11245 2196.21 -167: marker 95 100% |==================== [ 95 95 95 95 95 ] GENE5362 2211.87 -168: marker 94 100% |==================== [ 94 94 94 94 94 ] GENE5363 2227.36 -169: marker 113 100% |==================== [ 113 113 113 113 113 ] GENE13405 2241.15 -170: marker 216 100% |==================== [ 216 216 216 216 216 ] GENE11247 2257.49 -171: marker 93 100% |==================== [ 93 93 93 93 93 ] GENE5364 2263.23 -172: marker 214 60% |============ [ 214 214 214 90 90 ] GENE11251 2275.55 -173: marker 234/215 40% |======== [ 234 215 215 234 92 ] GENE11250 2287.62 -174: marker 92/90 40% |======== [ 90 92 92 214 215 ] GENE5365 2299.02 -175: marker 90/215 40% |======== [ 215 90 90 215 214 ] GENE5367 2310.62 -176: marker 234 60% |============ [ 92 234 234 92 234 ] C24_374-O23 2320.17 -177: marker 212 100% |==================== [ 212 212 212 212 212 ] GENE11253 2332.72 -178: marker 89 100% |==================== [ 89 89 89 89 89 ] GENE5369 2341.6 -179: marker 87 80% |================ [ 87 87 87 112 87 ] GENE5371 2350.86 -180: marker 85 60% |============ [ 85 85 85 86 112 ] GENE5374 2370.89 -181: marker 208 60% |============ [ 208 208 208 88 86 ] GENE11259 2377.06 -182: marker 209 60% |============ [ 209 209 209 87 88 ] GENE11258 2385.88 -183: marker 112 60% |============ [ 112 112 112 119 119 ] GENE13406 2397.71 -184: marker 86 60% |============ [ 86 86 86 210 210 ] GENE5372 2403.72 -185: marker 88 60% |============ [ 88 88 88 211 211 ] GENE5370 2409.86 -186: marker 119 60% |============ [ 119 119 119 91 91 ] GENE12841 2416.1 -187: marker 210 60% |============ [ 210 210 210 213 213 ] GENE11255 2430.56 -188: marker 211 60% |============ [ 211 211 211 84 84 ] GENE11254 2462.8 -189: marker 91 60% |============ [ 91 91 91 85 85 ] GENE5366 2488.74 -190: marker 213 60% |============ [ 213 213 213 208 208 ] GENE11252 2499.72 -191: marker 84 60% |============ [ 84 84 84 209 209 ] GENE5376 2523.63 -192: marker 103 100% |==================== [ 103 103 103 103 103 ] GENE13839 2550.02 -193: marker 83 100% |==================== [ 83 83 83 83 83 ] GENE5377 2572.25 -194: marker 207 100% |==================== [ 207 207 207 207 207 ] GENE11262 2584.08 -195: marker 82 100% |==================== [ 82 82 82 82 82 ] GENE5378 2608.94 -196: marker 81 100% |==================== [ 81 81 81 81 81 ] GENE5381 2685.68 -197: marker 111 100% |==================== [ 111 111 111 111 111 ] GENE13407 2705.33 -198: marker 80 100% |==================== [ 80 80 80 80 80 ] GENE5382 2717.36 -199: marker 79 100% |==================== [ 79 79 79 79 79 ] GENE5383 2735.95 -200: marker 231 100% |==================== [ 231 231 231 231 231 ] C24_381-L15 2750.77 -201: marker 232 100% |==================== [ 232 232 232 232 232 ] C24_381-I13 2759.05 -202: marker 228 100% |==================== [ 228 228 228 228 228 ] C24_382-I20 2764.65 -203: marker 78 100% |==================== [ 78 78 78 78 78 ] GENE5384 2776.52 -204: marker 206 60% |============ [ 206 206 206 225 225 ] GENE11270 2811.47 -205: marker 225 60% |============ [ 225 225 225 77 206 ] C24_EST1G4 2819.5 -206: marker 77 80% |================ [ 77 77 77 206 77 ] GENE5385 2828.32 -207: marker 76 80% |================ [ 76 76 76 205 76 ] GENE5387 2850.29 -208: marker 205 80% |================ [ 205 205 205 76 205 ] GENE11271 2860.14 -209: marker 204 100% |==================== [ 204 204 204 204 204 ] GENE11272 2871.39 -210: marker 203 80% |================ [ 203 203 75 203 203 ] GENE11273 2879.47 -211: marker 75 80% |================ [ 75 75 203 75 75 ] GENE5389 2882.05 -212: marker 202 100% |==================== [ 202 202 202 202 202 ] GENE11274 2904.73 -213: marker 235 60% |============ [ 193 193 235 235 235 ] C24_373-I12 2971.73 -214: marker 74 60% |============ [ 194 194 74 74 74 ] GENE5391 2980.17 -215: marker 201 60% |============ [ 192 192 201 201 201 ] GENE11275 2999.99 -216: marker 73 60% |============ [ 110 110 73 73 73 ] GENE5392 3014.97 -217: marker 200 60% |============ [ 66 66 200 200 200 ] GENE11276 3046.41 -218: marker 199 60% |============ [ 190 190 199 199 199 ] GENE11277 3098.87 -219: marker 198 60% |============ [ 191 191 198 198 198 ] GENE11278 3111 -220: marker 71 60% |============ [ 67 67 71 71 71 ] GENE5394 3145.87 -221: marker 69 60% |============ [ 68 68 69 69 69 ] GENE5396 3168.8 -222: marker 70 60% |============ [ 195 195 70 70 70 ] GENE5395 3186.01 -223: marker 72 60% |============ [ 171 171 72 72 72 ] GENE5393 3198.82 -224: marker 197 60% |============ [ 196 196 197 197 197 ] GENE11279 3203.82 -225: marker 196 60% |============ [ 72 72 196 196 196 ] GENE11281 3228.15 -226: marker 171 60% |============ [ 70 70 171 171 171 ] GENE1133 3249.19 -227: marker 195 60% |============ [ 69 69 195 195 195 ] GENE11283 3263.94 -228: marker 68 60% |============ [ 71 71 68 68 68 ] GENE5398 3273.43 -229: marker 194 60% |============ [ 198 198 194 194 194 ] GENE11284 3285.6 -230: marker 193 60% |============ [ 199 199 193 193 193 ] GENE11285 3290.51 -231: marker 67/200 40% |======== [ 200 200 110 67 67 ] GENE5402 3292.95 -232: marker 192 60% |============ [ 73 73 192 192 192 ] GENE11287 3295.34 -233: marker 201/110 40% |======== [ 201 201 67 110 110 ] GENE13408 3300.13 -234: marker 74/66 40% |======== [ 74 74 191 66 66 ] GENE5406 3307.44 -235: marker 190 60% |============ [ 235 235 190 190 190 ] GENE11290 3315.07 -236: marker 197/191 40% |======== [ 197 197 66 191 191 ] GENE11289 3344.6