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June 24, 2017 , 12h30.

THE CANINE RH10K MAP

Interpreting the map :

The CFA22 RH map is reported in the centromere-telomere orientation.
column 1 - marker position
column 2&3 - marker number Id.
column 4 - consensus %
column 5 - graphic bars
column 6 to 12 - the five maps data
column 7 - marker name
column 8 - cumulated distance in cR


The RH map shows the 5 maps automatically delivered by rh_tsp_map2  
program. Results of the comparison of these five maps is enlighted by  
horizontal bars of variable lengths. When a marker is present on the  
five maps at the same position, the horizontal bar has a maximum length  
and corresponds to mapping positions reaching high confidence and when  
a marker is present in the five maps at different positions, the  
horizontal bar has a shorter length reflecting a lower confidence level  
(at the top, a scale of 0 to 100% reflects the confidence level of the  
position of each marker). A consensus map follows the 5 maps computed  
by rh_tsp_map2. It corresponds to the markers having the best score at  
each position. Marker names of the consensus map are indicated in the  
penultimate column. The rightest column reports the cumulative distance  
between RH markers in centiRay (cR).
==================================================================
canine chromosome22
-157: marker 96      100%   |====================   [ 96  96  96  96  96  ] GENE4146       -0   
-156: marker 97      100%   |====================   [ 97  97  97  97  97  ] GENE4145       14.03
-155: marker 98      60%    |============           [ 98  98  131 98  131 ] GENE4144       19.45
-154: marker 131     60%    |============           [ 131 131 98  131 98  ] GENE10031      19.45
-153: marker 132     100%   |====================   [ 132 132 132 132 132 ] GENE10030      22.14
-152: marker 99      100%   |====================   [ 99  99  99  99  99  ] GENE4143       30.58
-151: marker 101/100 40%    |========               [ 101 100 100 133 101 ] GENE4141       39.17
-150: marker 133     80%    |================       [ 133 133 133 101 133 ] GENE10029      41.99
-149: marker 100     60%    |============           [ 100 101 101 100 100 ] GENE4142       44.82
-148: marker 134     100%   |====================   [ 134 134 134 134 134 ] GENE10028      56.78
-147: marker 135     100%   |====================   [ 135 135 135 135 135 ] GENE10027      71.54
-146: marker 102     60%    |============           [ 102 102 102 136 136 ] GENE4140       79.89
-145: marker 136     60%    |============           [ 136 136 136 102 102 ] GENE10026      82.59
-144: marker 103     100%   |====================   [ 103 103 103 103 103 ] GENE4139       85.29
-143: marker 104     100%   |====================   [ 104 104 104 104 104 ] GENE4138       90.88
-142: marker 137     100%   |====================   [ 137 137 137 137 137 ] GENE10024      96.81
-141: marker 105     100%   |====================   [ 105 105 105 105 105 ] GENE4137       106.14
-140: marker 106     100%   |====================   [ 106 106 106 106 106 ] GENE4136       109.07
-139: marker 138     100%   |====================   [ 138 138 138 138 138 ] GENE10023      109.07
-138: marker 139     80%    |================       [ 139 139 156 139 139 ] GENE10022      111.97
-137: marker 156     80%    |================       [ 156 156 139 156 156 ] C22_381-M9     111.97
-136: marker 140     100%   |====================   [ 140 140 140 140 140 ] GENE10021      117.82
-135: marker 107     60%    |============           [ 141 107 141 107 107 ] GENE4134       123.41
-134: marker 141     60%    |============           [ 107 141 107 141 141 ] GENE10020      123.41
-133: marker 108     100%   |====================   [ 108 108 108 108 108 ] GENE4133       145.66
-132: marker 142     100%   |====================   [ 142 142 142 142 142 ] GENE10019      166.01
-131: marker 157     100%   |====================   [ 157 157 157 157 157 ] C22_381-J2     206.96
-130: marker 109     80%    |================       [ 109 109 109 111 109 ] GENE4132       222.31
-129: marker 110     60%    |============           [ 110 110 110 143 143 ] GENE4131       228.22
-128: marker 143     60%    |============           [ 143 143 143 109 111 ] GENE10017      228.22
-127: marker 111     60%    |============           [ 111 111 111 110 110 ] GENE4130       228.22
-126: marker 145     100%   |====================   [ 145 145 145 145 145 ] GENE10015      237.51
-125: marker 112     100%   |====================   [ 112 112 112 112 112 ] GENE4129       243.67
-124: marker 144     100%   |====================   [ 144 144 144 144 144 ] GENE10016      256.52
-123: marker 113     100%   |====================   [ 113 113 113 113 113 ] GENE4128       273.08
-122: marker 146     100%   |====================   [ 146 146 146 146 146 ] GENE10014      279.16
-121: marker 116     80%    |================       [ 116 116 116 147 116 ] GENE4125       282.11
-120: marker 147     80%    |================       [ 147 147 147 116 147 ] GENE10013      282.11
-119: marker 114     100%   |====================   [ 114 114 114 114 114 ] GENE4127       285.05
-118: marker 148     60%    |============           [ 115 148 148 115 148 ] GENE10012      300.86
-117: marker 115     60%    |============           [ 148 115 115 148 115 ] GENE4126       300.86
-116: marker 118     60%    |============           [ 118 118 118 95  149 ] GENE4123       316.9
-115: marker 149/118 40%    |========               [ 149 149 95  118 118 ] GENE10011      326.19
-114: marker 95      60%    |============           [ 95  95  149 149 95  ] GENE6          326.19
-113: marker 117     100%   |====================   [ 117 117 117 117 117 ] GENE4124       329.13
-112: marker 119     60%    |============           [ 119 119 119 129 129 ] GENE4122       335.03
-111: marker 129     60%    |============           [ 129 129 129 119 119 ] GENE12702      340.82
-110: marker 130     60%    |============           [ 130 130 130 120 120 ] GENE12701      356.18
-109: marker 120     60%    |============           [ 120 120 120 130 130 ] GENE4121       359.11
-108: marker 121     100%   |====================   [ 121 121 121 121 121 ] GENE4120       361.99
-107: marker 122     60%    |============           [ 150 150 122 122 122 ] GENE4119       364.87
-106: marker 150     60%    |============           [ 122 122 150 150 150 ] GENE10006      364.87
-105: marker 151     100%   |====================   [ 151 151 151 151 151 ] GENE10005      370.9
-104: marker 123     100%   |====================   [ 123 123 123 123 123 ] GENE4118       386.58
-103: marker 152     80%    |================       [ 152 152 152 153 152 ] GENE10004      392.37
-102: marker 154     60%    |============           [ 154 154 154 126 124 ] GENE10002      398.06
-101: marker 153     60%    |============           [ 153 153 153 154 125 ] GENE10003      400.9
-100: marker 126     60%    |============           [ 126 126 126 125 154 ] GENE4115       415.48
-99:  marker 125     60%    |============           [ 125 125 125 124 126 ] GENE4116       445.2
-98:  marker 124     60%    |============           [ 124 124 124 152 153 ] GENE4117       477.21
-97:  marker 128     80%    |================       [ 128 128 128 127 128 ] GENE4113       530.16
-96:  marker 127     80%    |================       [ 127 127 127 128 127 ] GENE4114       541.89
-95:  marker 155     100%   |====================   [ 155 155 155 155 155 ] C22_382-E1     560.98
-94:  marker 94      100%   |====================   [ 94  94  94  94  94  ] C22_375-I5     607.65
-93:  marker 93      100%   |====================   [ 93  93  93  93  93  ] GENE9999       624.63
-92:  marker 13      100%   |====================   [ 13  13  13  13  13  ] GENE4111       694.16
-91:  marker 14      100%   |====================   [ 14  14  14  14  14  ] GENE4110       722.42
-90:  marker 15      80%    |================       [ 4   15  15  15  15  ] GENE4109       739.27
-89:  marker 4       80%    |================       [ 15  4   4   4   4   ] GENE9996       739.27
-88:  marker 5       100%   |====================   [ 5   5   5   5   5   ] GENE9995       745.3
-87:  marker 16      100%   |====================   [ 16  16  16  16  16  ] GENE4108       745.3
-86:  marker 7       100%   |====================   [ 7   7   7   7   7   ] GENE9993       761.04
-85:  marker 6       80%    |================       [ 6   6   6   6   17  ] GENE9994       763.98
-84:  marker 17      80%    |================       [ 17  17  17  17  6   ] GENE4107       766.92
-83:  marker 18      80%    |================       [ 19  18  18  18  18  ] GENE4106       796.61
-82:  marker 19      80%    |================       [ 18  19  19  19  19  ] GENE4105       796.61
-81:  marker 9       80%    |================       [ 9   20  9   9   9   ] GENE9991       799.44
-80:  marker 20      80%    |================       [ 20  9   20  20  20  ] GENE4104       799.44
-79:  marker 8       100%   |====================   [ 8   8   8   8   8   ] GENE9992       802.26
-78:  marker 21      100%   |====================   [ 21  21  21  21  21  ] GENE4103       831.3
-77:  marker 10      100%   |====================   [ 10  10  10  10  10  ] GENE9989       843.26
-76:  marker 22      100%   |====================   [ 22  22  22  22  22  ] GENE4102       859.3
-75:  marker 12      60%    |============           [ 12  12  12  23  23  ] GENE9987       869.04
-74:  marker 11      80%    |================       [ 11  11  11  11  12  ] GENE9988       869.04
-73:  marker 23      60%    |============           [ 23  23  23  12  11  ] GENE4101       872.27
-72:  marker 1       100%   |====================   [ 1   1   1   1   1   ] GENE4100       916.47
-71:  marker 2       100%   |====================   [ 2   2   2   2   2   ] GENE4099       953.71
-70:  marker 3       100%   |====================   [ 3   3   3   3   3   ] GENE13222      960.16
-69:  marker 92      100%   |====================   [ 92  92  92  92  92  ] C22_373-K17    1011.44
-68:  marker 24      100%   |====================   [ 24  24  24  24  24  ] GENE9985       1054.21
-67:  marker 25      100%   |====================   [ 25  25  25  25  25  ] GENE9984       1070.69
-66:  marker 88      100%   |====================   [ 88  88  88  88  88  ] C22_385-K7     1076.02
-65:  marker 89      100%   |====================   [ 89  89  89  89  89  ] C22_381-J20    1127.94
-64:  marker 91      100%   |====================   [ 91  91  91  91  91  ] C22_381-C18    1135.53
-63:  marker 26      80%    |================       [ 26  26  26  55  26  ] GENE9983       1169.42
-62:  marker 27      80%    |================       [ 27  27  27  26  27  ] GENE9982       1174.31
-61:  marker 79/55   40%    |========               [ 55  79  55  27  79  ] GENE4096       1181.69
-60:  marker 79      60%    |============           [ 79  55  79  79  55  ] GENE4062       1186.57
-59:  marker 53      100%   |====================   [ 53  53  53  53  53  ] GENE9949       1191.54
-58:  marker 52      80%    |================       [ 52  52  52  52  78  ] GENE9950       1201.64
-57:  marker 78      80%    |================       [ 78  78  78  78  52  ] GENE4063       1204.03
-56:  marker 51      100%   |====================   [ 51  51  51  51  51  ] GENE9951       1211.47
-55:  marker 86      100%   |====================   [ 86  86  86  86  86  ] GENE10636      1221.89
-54:  marker 50      100%   |====================   [ 50  50  50  50  50  ] GENE9952       1229.8
-53:  marker 85      100%   |====================   [ 85  85  85  85  85  ] GENE12692      1234.98
-52:  marker 77      100%   |====================   [ 77  77  77  77  77  ] GENE4067       1242.93
-51:  marker 49      100%   |====================   [ 49  49  49  49  49  ] GENE9954       1248.19
-50:  marker 76      100%   |====================   [ 76  76  76  76  76  ] GENE4068       1253.39
-49:  marker 48      100%   |====================   [ 48  48  48  48  48  ] GENE9955       1256.02
-48:  marker 75      100%   |====================   [ 75  75  75  75  75  ] GENE4069       1258.69
-47:  marker 47      100%   |====================   [ 47  47  47  47  47  ] GENE9956       1267 
-46:  marker 84      100%   |====================   [ 84  84  84  84  84  ] GENE12693      1288.36
-45:  marker 74      100%   |====================   [ 74  74  74  74  74  ] GENE4070       1302.97
-44:  marker 73      60%    |============           [ 73  73  46  46  73  ] GENE4071       1311.2
-43:  marker 46      60%    |============           [ 46  46  73  73  46  ] GENE9958       1313.81
-42:  marker 45      100%   |====================   [ 45  45  45  45  45  ] GENE9960       1327.44
-41:  marker 72      100%   |====================   [ 72  72  72  72  72  ] GENE4073       1338.48
-40:  marker 71      100%   |====================   [ 71  71  71  71  71  ] GENE4075       1352.39
-39:  marker 44      100%   |====================   [ 44  44  44  44  44  ] GENE9961       1354.91
-38:  marker 43      100%   |====================   [ 43  43  43  43  43  ] GENE9962       1359.98
-37:  marker 70      100%   |====================   [ 70  70  70  70  70  ] GENE4076       1365.15
-36:  marker 42      100%   |====================   [ 42  42  42  42  42  ] GENE9963       1367.69
-35:  marker 69      100%   |====================   [ 69  69  69  69  69  ] GENE4077       1380.67
-34:  marker 68      100%   |====================   [ 68  68  68  68  68  ] GENE4078       1388.11
-33:  marker 54      80%    |================       [ 54  54  67  54  54  ] GENE8786       1401.16
-32:  marker 67      80%    |================       [ 67  67  41  67  67  ] GENE4079       1403.71
-31:  marker 41      80%    |================       [ 41  41  83  41  41  ] GENE9965       1414.26
-30:  marker 83      80%    |================       [ 83  83  66  83  83  ] GENE12695      1427.59
-29:  marker 66      80%    |================       [ 66  66  54  66  66  ] GENE4080       1432.65
-28:  marker 39      80%    |================       [ 39  39  40  39  39  ] GENE9967       1437.74
-27:  marker 40      80%    |================       [ 40  40  39  40  40  ] GENE9966       1442.71
-26:  marker 65      100%   |====================   [ 65  65  65  65  65  ] GENE4081       1455.15
-25:  marker 38      60%    |============           [ 64  64  38  38  38  ] GENE9968       1467.64
-24:  marker 64      60%    |============           [ 38  38  64  64  64  ] GENE4082       1475.02
-23:  marker 37      100%   |====================   [ 37  37  37  37  37  ] GENE9969       1482.23
-22:  marker 62      100%   |====================   [ 62  62  62  62  62  ] GENE4085       1489.31
-21:  marker 36      100%   |====================   [ 36  36  36  36  36  ] GENE9971       1491.61
-20:  marker 63      100%   |====================   [ 63  63  63  63  63  ] GENE4084       1491.61
-19:  marker 82      100%   |====================   [ 82  82  82  82  82  ] GENE12696      1491.61
-18:  marker 61      100%   |====================   [ 61  61  61  61  61  ] GENE4086       1511.92
-17:  marker 59      100%   |====================   [ 59  59  59  59  59  ] GENE4088       1532.58
-16:  marker 33      100%   |====================   [ 33  33  33  33  33  ] GENE9974       1545.09
-15:  marker 60      100%   |====================   [ 60  60  60  60  60  ] GENE4087       1547.42
-14:  marker 34      100%   |====================   [ 34  34  34  34  34  ] GENE9973       1552.18
-13:  marker 35      100%   |====================   [ 35  35  35  35  35  ] GENE9972       1559.31
-12:  marker 32      100%   |====================   [ 32  32  32  32  32  ] GENE9975       1568.81
-11:  marker 87      100%   |====================   [ 87  87  87  87  87  ] GENE10559      1573.55
-10:  marker 58      100%   |====================   [ 58  58  58  58  58  ] GENE4089       1591.3
-9:   marker 31      100%   |====================   [ 31  31  31  31  31  ] GENE9976       1593.62
-8:   marker 81      100%   |====================   [ 81  81  81  81  81  ] GENE12697      1598.26
-7:   marker 57      100%   |====================   [ 57  57  57  57  57  ] GENE4090       1610.3
-6:   marker 90      100%   |====================   [ 90  90  90  90  90  ] C22_381-D5     1619.93
-5:   marker 80      100%   |====================   [ 80  80  80  80  80  ] GENE12698      1627.01
-4:   marker 56      100%   |====================   [ 56  56  56  56  56  ] GENE4093       1639.08
-3:   marker 30      100%   |====================   [ 30  30  30  30  30  ] GENE9978       1646.24
-2:   marker 29      80%    |================       [ 29  29  29  28  29  ] GENE9979       1648.58
-1:   marker 28      80%    |================       [ 28  28  28  29  28  ] GENE9980       1648.58