back
April 19, 2024 , 05h15.
Interpreting the map : The CFA22 RH map is reported in the centromere-telomere orientation. column 1 - marker position column 2&3 - marker number Id. column 4 - consensus % column 5 - graphic bars column 6 to 12 - the five maps data column 7 - marker name column 8 - cumulated distance in cR The RH map shows the 5 maps automatically delivered by rh_tsp_map2 program. Results of the comparison of these five maps is enlighted by horizontal bars of variable lengths. When a marker is present on the five maps at the same position, the horizontal bar has a maximum length and corresponds to mapping positions reaching high confidence and when a marker is present in the five maps at different positions, the horizontal bar has a shorter length reflecting a lower confidence level (at the top, a scale of 0 to 100% reflects the confidence level of the position of each marker). A consensus map follows the 5 maps computed by rh_tsp_map2. It corresponds to the markers having the best score at each position. Marker names of the consensus map are indicated in the penultimate column. The rightest column reports the cumulative distance between RH markers in centiRay (cR).==================================================================
-157: marker 96 100% |==================== [ 96 96 96 96 96 ] GENE4146 -0 -156: marker 97 100% |==================== [ 97 97 97 97 97 ] GENE4145 14.03 -155: marker 98 60% |============ [ 98 98 131 98 131 ] GENE4144 19.45 -154: marker 131 60% |============ [ 131 131 98 131 98 ] GENE10031 19.45 -153: marker 132 100% |==================== [ 132 132 132 132 132 ] GENE10030 22.14 -152: marker 99 100% |==================== [ 99 99 99 99 99 ] GENE4143 30.58 -151: marker 101/100 40% |======== [ 101 100 100 133 101 ] GENE4141 39.17 -150: marker 133 80% |================ [ 133 133 133 101 133 ] GENE10029 41.99 -149: marker 100 60% |============ [ 100 101 101 100 100 ] GENE4142 44.82 -148: marker 134 100% |==================== [ 134 134 134 134 134 ] GENE10028 56.78 -147: marker 135 100% |==================== [ 135 135 135 135 135 ] GENE10027 71.54 -146: marker 102 60% |============ [ 102 102 102 136 136 ] GENE4140 79.89 -145: marker 136 60% |============ [ 136 136 136 102 102 ] GENE10026 82.59 -144: marker 103 100% |==================== [ 103 103 103 103 103 ] GENE4139 85.29 -143: marker 104 100% |==================== [ 104 104 104 104 104 ] GENE4138 90.88 -142: marker 137 100% |==================== [ 137 137 137 137 137 ] GENE10024 96.81 -141: marker 105 100% |==================== [ 105 105 105 105 105 ] GENE4137 106.14 -140: marker 106 100% |==================== [ 106 106 106 106 106 ] GENE4136 109.07 -139: marker 138 100% |==================== [ 138 138 138 138 138 ] GENE10023 109.07 -138: marker 139 80% |================ [ 139 139 156 139 139 ] GENE10022 111.97 -137: marker 156 80% |================ [ 156 156 139 156 156 ] C22_381-M9 111.97 -136: marker 140 100% |==================== [ 140 140 140 140 140 ] GENE10021 117.82 -135: marker 107 60% |============ [ 141 107 141 107 107 ] GENE4134 123.41 -134: marker 141 60% |============ [ 107 141 107 141 141 ] GENE10020 123.41 -133: marker 108 100% |==================== [ 108 108 108 108 108 ] GENE4133 145.66 -132: marker 142 100% |==================== [ 142 142 142 142 142 ] GENE10019 166.01 -131: marker 157 100% |==================== [ 157 157 157 157 157 ] C22_381-J2 206.96 -130: marker 109 80% |================ [ 109 109 109 111 109 ] GENE4132 222.31 -129: marker 110 60% |============ [ 110 110 110 143 143 ] GENE4131 228.22 -128: marker 143 60% |============ [ 143 143 143 109 111 ] GENE10017 228.22 -127: marker 111 60% |============ [ 111 111 111 110 110 ] GENE4130 228.22 -126: marker 145 100% |==================== [ 145 145 145 145 145 ] GENE10015 237.51 -125: marker 112 100% |==================== [ 112 112 112 112 112 ] GENE4129 243.67 -124: marker 144 100% |==================== [ 144 144 144 144 144 ] GENE10016 256.52 -123: marker 113 100% |==================== [ 113 113 113 113 113 ] GENE4128 273.08 -122: marker 146 100% |==================== [ 146 146 146 146 146 ] GENE10014 279.16 -121: marker 116 80% |================ [ 116 116 116 147 116 ] GENE4125 282.11 -120: marker 147 80% |================ [ 147 147 147 116 147 ] GENE10013 282.11 -119: marker 114 100% |==================== [ 114 114 114 114 114 ] GENE4127 285.05 -118: marker 148 60% |============ [ 115 148 148 115 148 ] GENE10012 300.86 -117: marker 115 60% |============ [ 148 115 115 148 115 ] GENE4126 300.86 -116: marker 118 60% |============ [ 118 118 118 95 149 ] GENE4123 316.9 -115: marker 149/118 40% |======== [ 149 149 95 118 118 ] GENE10011 326.19 -114: marker 95 60% |============ [ 95 95 149 149 95 ] GENE6 326.19 -113: marker 117 100% |==================== [ 117 117 117 117 117 ] GENE4124 329.13 -112: marker 119 60% |============ [ 119 119 119 129 129 ] GENE4122 335.03 -111: marker 129 60% |============ [ 129 129 129 119 119 ] GENE12702 340.82 -110: marker 130 60% |============ [ 130 130 130 120 120 ] GENE12701 356.18 -109: marker 120 60% |============ [ 120 120 120 130 130 ] GENE4121 359.11 -108: marker 121 100% |==================== [ 121 121 121 121 121 ] GENE4120 361.99 -107: marker 122 60% |============ [ 150 150 122 122 122 ] GENE4119 364.87 -106: marker 150 60% |============ [ 122 122 150 150 150 ] GENE10006 364.87 -105: marker 151 100% |==================== [ 151 151 151 151 151 ] GENE10005 370.9 -104: marker 123 100% |==================== [ 123 123 123 123 123 ] GENE4118 386.58 -103: marker 152 80% |================ [ 152 152 152 153 152 ] GENE10004 392.37 -102: marker 154 60% |============ [ 154 154 154 126 124 ] GENE10002 398.06 -101: marker 153 60% |============ [ 153 153 153 154 125 ] GENE10003 400.9 -100: marker 126 60% |============ [ 126 126 126 125 154 ] GENE4115 415.48 -99: marker 125 60% |============ [ 125 125 125 124 126 ] GENE4116 445.2 -98: marker 124 60% |============ [ 124 124 124 152 153 ] GENE4117 477.21 -97: marker 128 80% |================ [ 128 128 128 127 128 ] GENE4113 530.16 -96: marker 127 80% |================ [ 127 127 127 128 127 ] GENE4114 541.89 -95: marker 155 100% |==================== [ 155 155 155 155 155 ] C22_382-E1 560.98 -94: marker 94 100% |==================== [ 94 94 94 94 94 ] C22_375-I5 607.65 -93: marker 93 100% |==================== [ 93 93 93 93 93 ] GENE9999 624.63 -92: marker 13 100% |==================== [ 13 13 13 13 13 ] GENE4111 694.16 -91: marker 14 100% |==================== [ 14 14 14 14 14 ] GENE4110 722.42 -90: marker 15 80% |================ [ 4 15 15 15 15 ] GENE4109 739.27 -89: marker 4 80% |================ [ 15 4 4 4 4 ] GENE9996 739.27 -88: marker 5 100% |==================== [ 5 5 5 5 5 ] GENE9995 745.3 -87: marker 16 100% |==================== [ 16 16 16 16 16 ] GENE4108 745.3 -86: marker 7 100% |==================== [ 7 7 7 7 7 ] GENE9993 761.04 -85: marker 6 80% |================ [ 6 6 6 6 17 ] GENE9994 763.98 -84: marker 17 80% |================ [ 17 17 17 17 6 ] GENE4107 766.92 -83: marker 18 80% |================ [ 19 18 18 18 18 ] GENE4106 796.61 -82: marker 19 80% |================ [ 18 19 19 19 19 ] GENE4105 796.61 -81: marker 9 80% |================ [ 9 20 9 9 9 ] GENE9991 799.44 -80: marker 20 80% |================ [ 20 9 20 20 20 ] GENE4104 799.44 -79: marker 8 100% |==================== [ 8 8 8 8 8 ] GENE9992 802.26 -78: marker 21 100% |==================== [ 21 21 21 21 21 ] GENE4103 831.3 -77: marker 10 100% |==================== [ 10 10 10 10 10 ] GENE9989 843.26 -76: marker 22 100% |==================== [ 22 22 22 22 22 ] GENE4102 859.3 -75: marker 12 60% |============ [ 12 12 12 23 23 ] GENE9987 869.04 -74: marker 11 80% |================ [ 11 11 11 11 12 ] GENE9988 869.04 -73: marker 23 60% |============ [ 23 23 23 12 11 ] GENE4101 872.27 -72: marker 1 100% |==================== [ 1 1 1 1 1 ] GENE4100 916.47 -71: marker 2 100% |==================== [ 2 2 2 2 2 ] GENE4099 953.71 -70: marker 3 100% |==================== [ 3 3 3 3 3 ] GENE13222 960.16 -69: marker 92 100% |==================== [ 92 92 92 92 92 ] C22_373-K17 1011.44 -68: marker 24 100% |==================== [ 24 24 24 24 24 ] GENE9985 1054.21 -67: marker 25 100% |==================== [ 25 25 25 25 25 ] GENE9984 1070.69 -66: marker 88 100% |==================== [ 88 88 88 88 88 ] C22_385-K7 1076.02 -65: marker 89 100% |==================== [ 89 89 89 89 89 ] C22_381-J20 1127.94 -64: marker 91 100% |==================== [ 91 91 91 91 91 ] C22_381-C18 1135.53 -63: marker 26 80% |================ [ 26 26 26 55 26 ] GENE9983 1169.42 -62: marker 27 80% |================ [ 27 27 27 26 27 ] GENE9982 1174.31 -61: marker 79/55 40% |======== [ 55 79 55 27 79 ] GENE4096 1181.69 -60: marker 79 60% |============ [ 79 55 79 79 55 ] GENE4062 1186.57 -59: marker 53 100% |==================== [ 53 53 53 53 53 ] GENE9949 1191.54 -58: marker 52 80% |================ [ 52 52 52 52 78 ] GENE9950 1201.64 -57: marker 78 80% |================ [ 78 78 78 78 52 ] GENE4063 1204.03 -56: marker 51 100% |==================== [ 51 51 51 51 51 ] GENE9951 1211.47 -55: marker 86 100% |==================== [ 86 86 86 86 86 ] GENE10636 1221.89 -54: marker 50 100% |==================== [ 50 50 50 50 50 ] GENE9952 1229.8 -53: marker 85 100% |==================== [ 85 85 85 85 85 ] GENE12692 1234.98 -52: marker 77 100% |==================== [ 77 77 77 77 77 ] GENE4067 1242.93 -51: marker 49 100% |==================== [ 49 49 49 49 49 ] GENE9954 1248.19 -50: marker 76 100% |==================== [ 76 76 76 76 76 ] GENE4068 1253.39 -49: marker 48 100% |==================== [ 48 48 48 48 48 ] GENE9955 1256.02 -48: marker 75 100% |==================== [ 75 75 75 75 75 ] GENE4069 1258.69 -47: marker 47 100% |==================== [ 47 47 47 47 47 ] GENE9956 1267 -46: marker 84 100% |==================== [ 84 84 84 84 84 ] GENE12693 1288.36 -45: marker 74 100% |==================== [ 74 74 74 74 74 ] GENE4070 1302.97 -44: marker 73 60% |============ [ 73 73 46 46 73 ] GENE4071 1311.2 -43: marker 46 60% |============ [ 46 46 73 73 46 ] GENE9958 1313.81 -42: marker 45 100% |==================== [ 45 45 45 45 45 ] GENE9960 1327.44 -41: marker 72 100% |==================== [ 72 72 72 72 72 ] GENE4073 1338.48 -40: marker 71 100% |==================== [ 71 71 71 71 71 ] GENE4075 1352.39 -39: marker 44 100% |==================== [ 44 44 44 44 44 ] GENE9961 1354.91 -38: marker 43 100% |==================== [ 43 43 43 43 43 ] GENE9962 1359.98 -37: marker 70 100% |==================== [ 70 70 70 70 70 ] GENE4076 1365.15 -36: marker 42 100% |==================== [ 42 42 42 42 42 ] GENE9963 1367.69 -35: marker 69 100% |==================== [ 69 69 69 69 69 ] GENE4077 1380.67 -34: marker 68 100% |==================== [ 68 68 68 68 68 ] GENE4078 1388.11 -33: marker 54 80% |================ [ 54 54 67 54 54 ] GENE8786 1401.16 -32: marker 67 80% |================ [ 67 67 41 67 67 ] GENE4079 1403.71 -31: marker 41 80% |================ [ 41 41 83 41 41 ] GENE9965 1414.26 -30: marker 83 80% |================ [ 83 83 66 83 83 ] GENE12695 1427.59 -29: marker 66 80% |================ [ 66 66 54 66 66 ] GENE4080 1432.65 -28: marker 39 80% |================ [ 39 39 40 39 39 ] GENE9967 1437.74 -27: marker 40 80% |================ [ 40 40 39 40 40 ] GENE9966 1442.71 -26: marker 65 100% |==================== [ 65 65 65 65 65 ] GENE4081 1455.15 -25: marker 38 60% |============ [ 64 64 38 38 38 ] GENE9968 1467.64 -24: marker 64 60% |============ [ 38 38 64 64 64 ] GENE4082 1475.02 -23: marker 37 100% |==================== [ 37 37 37 37 37 ] GENE9969 1482.23 -22: marker 62 100% |==================== [ 62 62 62 62 62 ] GENE4085 1489.31 -21: marker 36 100% |==================== [ 36 36 36 36 36 ] GENE9971 1491.61 -20: marker 63 100% |==================== [ 63 63 63 63 63 ] GENE4084 1491.61 -19: marker 82 100% |==================== [ 82 82 82 82 82 ] GENE12696 1491.61 -18: marker 61 100% |==================== [ 61 61 61 61 61 ] GENE4086 1511.92 -17: marker 59 100% |==================== [ 59 59 59 59 59 ] GENE4088 1532.58 -16: marker 33 100% |==================== [ 33 33 33 33 33 ] GENE9974 1545.09 -15: marker 60 100% |==================== [ 60 60 60 60 60 ] GENE4087 1547.42 -14: marker 34 100% |==================== [ 34 34 34 34 34 ] GENE9973 1552.18 -13: marker 35 100% |==================== [ 35 35 35 35 35 ] GENE9972 1559.31 -12: marker 32 100% |==================== [ 32 32 32 32 32 ] GENE9975 1568.81 -11: marker 87 100% |==================== [ 87 87 87 87 87 ] GENE10559 1573.55 -10: marker 58 100% |==================== [ 58 58 58 58 58 ] GENE4089 1591.3 -9: marker 31 100% |==================== [ 31 31 31 31 31 ] GENE9976 1593.62 -8: marker 81 100% |==================== [ 81 81 81 81 81 ] GENE12697 1598.26 -7: marker 57 100% |==================== [ 57 57 57 57 57 ] GENE4090 1610.3 -6: marker 90 100% |==================== [ 90 90 90 90 90 ] C22_381-D5 1619.93 -5: marker 80 100% |==================== [ 80 80 80 80 80 ] GENE12698 1627.01 -4: marker 56 100% |==================== [ 56 56 56 56 56 ] GENE4093 1639.08 -3: marker 30 100% |==================== [ 30 30 30 30 30 ] GENE9978 1646.24 -2: marker 29 80% |================ [ 29 29 29 28 29 ] GENE9979 1648.58 -1: marker 28 80% |================ [ 28 28 28 29 28 ] GENE9980 1648.58