back
August 17, 2017 , 17h20.

THE CANINE RH10K MAP

Interpreting the map :

The CFA21 RH map is reported in the centromere-telomere orientation.
column 1 - marker position
column 2&3 - marker number Id.
column 4 - consensus %
column 5 - graphic bars
column 6 to 12 - the five maps data
column 7 - marker name
column 8 - cumulated distance in cR


The RH map shows the 5 maps automatically delivered by rh_tsp_map2  
program. Results of the comparison of these five maps is enlighted by  
horizontal bars of variable lengths. When a marker is present on the  
five maps at the same position, the horizontal bar has a maximum length  
and corresponds to mapping positions reaching high confidence and when  
a marker is present in the five maps at different positions, the  
horizontal bar has a shorter length reflecting a lower confidence level  
(at the top, a scale of 0 to 100% reflects the confidence level of the  
position of each marker). A consensus map follows the 5 maps computed  
by rh_tsp_map2. It corresponds to the markers having the best score at  
each position. Marker names of the consensus map are indicated in the  
penultimate column. The rightest column reports the cumulative distance  
between RH markers in centiRay (cR).
==================================================================
canine chromosome21
-229: marker 183     100%   |====================   [ 183 183 183 183 183 ] GENE3503       -0   
-228: marker 168     100%   |====================   [ 168 168 168 168 168 ] GENE9396       3.34 
-227: marker 181     60%    |============           [ 166 181 166 181 181 ] GENE3505       10.23
-226: marker 166     60%    |============           [ 181 166 181 166 166 ] GENE9398       13.57
-225: marker 165     100%   |====================   [ 165 165 165 165 165 ] GENE9399       23.95
-224: marker 182     100%   |====================   [ 182 182 182 182 182 ] GENE3504       48.81
-223: marker 167     100%   |====================   [ 167 167 167 167 167 ] GENE9397       61.12
-222: marker 229     100%   |====================   [ 229 229 229 229 229 ] C21_374-A7     77.06
-221: marker 184     60%    |============           [ 184 184 184 201 201 ] GENE3452       80.75
-220: marker 201     60%    |============           [ 201 201 201 184 184 ] GENE13552      95.05
-219: marker 164     60%    |============           [ 164 164 164 222 222 ] GENE9495       126.96
-218: marker 222     60%    |============           [ 222 222 222 185 185 ] GENE13175      164.82
-217: marker 185     60%    |============           [ 185 185 185 170 170 ] GENE3451       175.86
-216: marker 169     60%    |============           [ 169 169 169 186 186 ] GENE9344       195.72
-215: marker 186/169 40%    |========               [ 170 186 186 169 169 ] GENE3450       211  
-214: marker 170/164 40%    |========               [ 186 170 170 164 164 ] GENE9342       211  
-213: marker 187     100%   |====================   [ 187 187 187 187 187 ] GENE3449       236.32
-212: marker 225     100%   |====================   [ 225 225 225 225 225 ] GENE12872      262.64
-211: marker 188     100%   |====================   [ 188 188 188 188 188 ] GENE3448       283.43
-210: marker 171     80%    |================       [ 171 171 171 171 226 ] GENE9341       298.7
-209: marker 226     80%    |================       [ 226 226 226 226 171 ] C21_417-J8     302.04
-208: marker 202     100%   |====================   [ 202 202 202 202 202 ] GENE13551      334.9
-207: marker 203     100%   |====================   [ 203 203 203 203 203 ] GENE13550      341.26
-206: marker 204     100%   |====================   [ 204 204 204 204 204 ] GENE13549      354.75
-205: marker 228     100%   |====================   [ 228 228 228 228 228 ] C21_380-P12    376.37
-204: marker 189     100%   |====================   [ 189 189 189 189 189 ] GENE3444       401.69
-203: marker 206     100%   |====================   [ 206 206 206 206 206 ] GENE13547      411.78
-202: marker 205     100%   |====================   [ 205 205 205 205 205 ] GENE13548      422.15
-201: marker 207     100%   |====================   [ 207 207 207 207 207 ] GENE13546      431.97
-200: marker 208     100%   |====================   [ 208 208 208 208 208 ] GENE13545      434.99
-199: marker 224     100%   |====================   [ 224 224 224 224 224 ] GENE13172      441.19
-198: marker 190/223 40%    |========               [ 190 223 211 190 213 ] GENE3439       444.36
-197: marker 190/213 40%    |========               [ 213 190 190 209 211 ] GENE13540      444.36
-196: marker 191     60%    |============           [ 191 191 213 191 209 ] GENE3438       444.36
-195: marker 211/191 40%    |========               [ 211 211 191 213 191 ] GENE13542      444.36
-194: marker 223     60%    |============           [ 223 213 209 223 223 ] GENE13173      447.61
-193: marker 209/223 40%    |========               [ 209 209 223 211 190 ] GENE13544      454.13
-192: marker 192     100%   |====================   [ 192 192 192 192 192 ] GENE3437       463.95
-191: marker 172     60%    |============           [ 172 172 172 210 210 ] GENE9329       473.77
-190: marker 214/212 40%    |========               [ 214 212 214 212 172 ] GENE13539      473.77
-189: marker 212     60%    |============           [ 212 214 212 172 212 ] GENE13541      473.77
-188: marker 210     60%    |============           [ 210 210 210 214 214 ] GENE13543      476.86
-187: marker 193     100%   |====================   [ 193 193 193 193 193 ] GENE3436       490.35
-186: marker 173     100%   |====================   [ 173 173 173 173 173 ] GENE9328       513.43
-185: marker 175     100%   |====================   [ 175 175 175 175 175 ] GENE9325       525.27
-184: marker 216     80%    |================       [ 216 216 216 216 215 ] GENE13537      533.15
-183: marker 194     60%    |============           [ 194 194 194 217 174 ] GENE3432       536.81
-182: marker 217     60%    |============           [ 217 217 217 194 216 ] GENE13536      547.5
-181: marker 218     80%    |================       [ 218 218 218 218 194 ] GENE13535      574.53
-180: marker 195     80%    |================       [ 195 195 195 195 217 ] GENE3431       581.87
-179: marker 196     80%    |================       [ 196 196 196 196 218 ] GENE3430       585.53
-178: marker 198     60%    |============           [ 198 198 198 197 195 ] GENE3428       589.19
-177: marker 176     60%    |============           [ 197 176 176 176 196 ] GENE9323       592.85
-176: marker 197/176 40%    |========               [ 176 197 197 198 176 ] GENE3429       592.85
-175: marker 227     60%    |============           [ 227 227 227 177 197 ] C21_385-F17    611.88
-174: marker 177     60%    |============           [ 177 177 177 227 198 ] GENE9322       618.76
-173: marker 219     80%    |================       [ 219 219 219 219 177 ] GENE13534      625.87
-172: marker 199     80%    |================       [ 199 199 199 199 227 ] GENE3425       641.71
-171: marker 178     80%    |================       [ 178 178 178 178 219 ] GENE9320       664.79
-170: marker 220     60%    |============           [ 220 220 179 220 199 ] GENE13532      679.09
-169: marker 179     60%    |============           [ 179 179 220 179 178 ] GENE9319       679.09
-168: marker 180     80%    |================       [ 180 180 180 180 179 ] GENE9318       695.55
-167: marker 221     80%    |================       [ 221 221 221 221 220 ] GENE13531      728.84
-166: marker 200     80%    |================       [ 200 200 200 200 180 ] GENE3424       736.71
-165: marker 96      80%    |================       [ 96  96  96  96  221 ] GENE3423       773.13
-164: marker 97      80%    |================       [ 97  97  97  97  200 ] GENE3422       777.21
-163: marker 40      80%    |================       [ 40  40  40  40  96  ] GENE9316       781.29
-162: marker 44      80%    |================       [ 44  44  44  44  97  ] GENE9308       801.93
-161: marker 43      80%    |================       [ 43  43  43  43  40  ] GENE9309       813.36
-160: marker 103     80%    |================       [ 103 103 103 103 44  ] GENE3415       829.82
-159: marker 101     80%    |================       [ 101 101 101 101 43  ] GENE3417       833.74
-158: marker 151     80%    |================       [ 151 151 151 151 103 ] GENE13171      837.53
-157: marker 98      80%    |================       [ 98  98  98  98  101 ] GENE3421       849.37
-156: marker 156     80%    |================       [ 156 156 156 156 151 ] C21_381-I15    853.3
-155: marker 100     80%    |================       [ 100 100 100 100 98  ] GENE3419       857.38
-154: marker 41/157  40%    |========               [ 157 41  157 41  156 ] C21_381-D11    861.63
-153: marker 41/157  40%    |========               [ 41  157 41  157 100 ] GENE9313       866.08
-152: marker 99      80%    |================       [ 99  99  99  99  41  ] GENE3420       875.42
-151: marker 136     80%    |================       [ 136 136 136 136 157 ] GENE13529      880.08
-150: marker 42      80%    |================       [ 42  42  42  42  99  ] GENE9312       889.91
-149: marker 102     80%    |================       [ 102 102 102 102 136 ] GENE3416       900.3
-148: marker 215     80%    |================       [ 215 215 215 215 42  ] GENE13538      946.07
-147: marker 174     80%    |================       [ 174 174 174 174 102 ] GENE9327       972.34
-146: marker 46      100%   |====================   [ 46  46  46  46  46  ] GENE9305       1007.41
-145: marker 45      100%   |====================   [ 45  45  45  45  45  ] GENE9306       1036.53
-144: marker 104     100%   |====================   [ 104 104 104 104 104 ] GENE3412       1039.87
-143: marker 160     100%   |====================   [ 160 160 160 160 160 ] C21_376-K3     1059.92
-142: marker 137     100%   |====================   [ 137 137 137 137 137 ] GENE13527      1067.29
-141: marker 47      100%   |====================   [ 47  47  47  47  47  ] GENE9304       1085.23
-140: marker 48      100%   |====================   [ 48  48  48  48  48  ] GENE9303       1092.34
-139: marker 138     100%   |====================   [ 138 138 138 138 138 ] GENE13526      1099.23
-138: marker 105     100%   |====================   [ 105 105 105 105 105 ] GENE3411       1102.57
-137: marker 106     100%   |====================   [ 106 106 106 106 106 ] GENE3410       1109.47
-136: marker 139     60%    |============           [ 139 139 139 107 107 ] GENE13525      1120.16
-135: marker 107     60%    |============           [ 107 107 107 139 139 ] GENE3409       1141.78
-134: marker 109/108 40%    |========               [ 109 109 110 108 108 ] GENE3404       1214.87
-133: marker 49/110  40%    |========               [ 110 110 109 49  49  ] GENE9302       1214.87
-132: marker 49      60%    |============           [ 49  49  49  50  50  ] GENE3403       1254.38
-131: marker 50      60%    |============           [ 50  50  50  51  51  ] GENE9300       1277.97
-130: marker 108     60%    |============           [ 108 108 108 52  52  ] GENE3407       1295.12
-129: marker 51      60%    |============           [ 51  51  51  140 140 ] GENE9299       1312.28
-128: marker 52      60%    |============           [ 52  52  52  110 152 ] GENE9297       1320.15
-127: marker 140     60%    |============           [ 140 140 140 109 109 ] GENE13524      1331.99
-126: marker 152     60%    |============           [ 152 152 152 53  110 ] GENE13169      1343.84
-125: marker 53      80%    |================       [ 53  53  53  152 53  ] GENE9296       1351.43
-124: marker 111     100%   |====================   [ 111 111 111 111 111 ] GENE3402       1377.56
-123: marker 54      100%   |====================   [ 54  54  54  54  54  ] GENE9294       1403.7
-122: marker 141     100%   |====================   [ 141 141 141 141 141 ] GENE13523      1423.57
-121: marker 112     100%   |====================   [ 112 112 112 112 112 ] GENE3400       1427.11
-120: marker 142     80%    |================       [ 142 142 142 143 142 ] GENE13522      1446.98
-119: marker 113     100%   |====================   [ 113 113 113 113 113 ] GENE3399       1463.44
-118: marker 143     80%    |================       [ 143 143 143 142 143 ] GENE13521      1479.28
-117: marker 115     80%    |================       [ 115 115 115 114 115 ] GENE3396       1490.7
-116: marker 57      80%    |================       [ 57  57  57  118 57  ] GENE9286       1502.54
-115: marker 117     100%   |====================   [ 117 117 117 117 117 ] GENE3393       1510.42
-114: marker 118     80%    |================       [ 118 118 118 57  118 ] GENE3392       1527.57
-113: marker 114     80%    |================       [ 114 114 114 115 114 ] GENE3397       1570.21
-112: marker 55      100%   |====================   [ 55  55  55  55  55  ] GENE9290       1597.3
-111: marker 153     100%   |====================   [ 153 153 153 153 153 ] GENE13168      1608.72
-110: marker 116     80%    |================       [ 116 116 116 145 116 ] GENE3395       1619.76
-109: marker 145     80%    |================       [ 145 145 145 116 145 ] GENE13492      1623.2
-108: marker 144     100%   |====================   [ 144 144 144 144 144 ] GENE13520      1630.09
-107: marker 56      100%   |====================   [ 56  56  56  56  56  ] GENE9288       1636.98
-106: marker 149     80%    |================       [ 149 149 149 149 38  ] GENE13189      1651.75
-105: marker 134     60%    |============           [ 134 150 134 134 58  ] GENE13587      1662.45
-104: marker 150     60%    |============           [ 150 134 150 150 94  ] GENE13188      1662.45
-103: marker 37      80%    |================       [ 37  37  37  37  92  ] GENE9455       1673.14
-102: marker 92      80%    |================       [ 92  92  92  92  37  ] GENE3562       1684.18
-101: marker 94      80%    |================       [ 94  94  94  94  134 ] GENE3558       1695.22
-100: marker 58      80%    |================       [ 58  58  58  58  150 ] GENE9285       1702.11
-99:  marker 38      80%    |================       [ 38  38  38  38  149 ] GENE9452       1705.45
-98:  marker 93      100%   |====================   [ 93  93  93  93  93  ] GENE3560       1715.83
-97:  marker 39      100%   |====================   [ 39  39  39  39  39  ] GENE9451       1726.52
-96:  marker 36      100%   |====================   [ 36  36  36  36  36  ] GENE9456       1746.39
-95:  marker 163     100%   |====================   [ 163 163 163 163 163 ] C21_373-I14    1762.96
-94:  marker 32      100%   |====================   [ 32  32  32  32  32  ] GENE9461       1770.84
-93:  marker 31      60%    |============           [ 31  31  31  88  88  ] GENE9462       1774.38
-92:  marker 131     60%    |============           [ 131 131 131 30  30  ] GENE13591      1777.82
-91:  marker 30      60%    |============           [ 30  30  30  131 131 ] GENE9463       1781.16
-90:  marker 88      60%    |============           [ 88  88  88  89  89  ] GENE3571       1787.86
-89:  marker 132     60%    |============           [ 132 132 132 33  33  ] GENE13590      1801.74
-88:  marker 133     60%    |============           [ 133 133 133 90  90  ] GENE13589      1812.11
-87:  marker 90      60%    |============           [ 90  90  90  133 133 ] GENE3566       1819.22
-86:  marker 89/132  40%    |========               [ 33  89  89  132 132 ] GENE3567       1830.64
-85:  marker 33/31   40%    |========               [ 89  33  33  31  31  ] GENE9460       1842.06
-84:  marker 34      100%   |====================   [ 34  34  34  34  34  ] GENE9458       1849.4
-83:  marker 91      100%   |====================   [ 91  91  91  91  91  ] GENE3565       1879.4
-82:  marker 35      100%   |====================   [ 35  35  35  35  35  ] GENE9457       1921.27
-81:  marker 87      100%   |====================   [ 87  87  87  87  87  ] GENE3573       1954.13
-80:  marker 86      60%    |============           [ 86  86  86  28  1   ] GENE3574       1969.83
-79:  marker 86/1    40%    |========               [ 1   28  1   86  86  ] GENE9885       1975.76
-78:  marker 28      60%    |============           [ 28  1   28  1   28  ] GENE9466       1975.76
-77:  marker 29      100%   |====================   [ 29  29  29  29  29  ] GENE9465       1978.78
-76:  marker 27      100%   |====================   [ 27  27  27  27  27  ] GENE9467       1988.35
-75:  marker 83      100%   |====================   [ 83  83  83  83  83  ] GENE3577       2009.34
-74:  marker 80      80%    |================       [ 80  80  80  80  81  ] GENE3580       2020.03
-73:  marker 81      80%    |================       [ 81  81  81  81  80  ] GENE3579       2027.37
-72:  marker 82      60%    |============           [ 130 82  130 82  82  ] GENE3578       2045.31
-71:  marker 77      60%    |============           [ 84  77  84  77  77  ] GENE3588       2054.66
-70:  marker 25      60%    |============           [ 85  25  85  25  25  ] GENE9470       2066.88
-69:  marker 26      80%    |================       [ 26  26  26  26  85  ] GENE9469       2069.84
-68:  marker 85/25   40%    |========               [ 25  85  25  85  26  ] GENE3575       2072.79
-67:  marker 84      60%    |============           [ 77  84  77  84  84  ] GENE3576       2081.93
-66:  marker 130     60%    |============           [ 82  130 82  130 130 ] GENE13592      2088.13
-65:  marker 148     100%   |====================   [ 148 148 148 148 148 ] GENE13190      2097.47
-64:  marker 129     100%   |====================   [ 129 129 129 129 129 ] GENE13593      2117.34
-63:  marker 79      60%    |============           [ 79  128 79  79  128 ] GENE3582       2124.04
-62:  marker 128     60%    |============           [ 128 79  128 128 79  ] GENE13594      2127.48
-61:  marker 154     60%    |============           [ 154 24  154 24  154 ] C21_385-G1     2145.13
-60:  marker 24      60%    |============           [ 24  154 24  154 24  ] GENE9474       2151.57
-59:  marker 119     60%    |============           [ 119 23  119 119 23  ] GENE2437       2158.09
-58:  marker 23      60%    |============           [ 23  119 23  23  119 ] GENE9475       2161.26
-57:  marker 78      80%    |================       [ 78  78  78  22  78  ] GENE3587       2171.08
-56:  marker 22      80%    |================       [ 22  22  22  78  22  ] GENE9476       2174.33
-55:  marker 161     100%   |====================   [ 161 161 161 161 161 ] C21_376-G13    2174.33
-54:  marker 20      80%    |================       [ 20  20  20  19  20  ] GENE9478       2177.71
-53:  marker 127     80%    |================       [ 127 127 127 21  127 ] GENE13596      2188.4
-52:  marker 21      80%    |================       [ 21  21  21  127 21  ] GENE9477       2199.1
-51:  marker 19      80%    |================       [ 19  19  19  20  19  ] GENE9479       2208.91
-50:  marker 162     100%   |====================   [ 162 162 162 162 162 ] C21_375-A16    2241.77
-49:  marker 76      100%   |====================   [ 76  76  76  76  76  ] GENE3590       2283.94
-48:  marker 18/125  40%    |========               [ 18  17  18  125 125 ] GENE9480       2310.97
-47:  marker 126     60%    |============           [ 126 126 126 18  18  ] GENE13597      2324.46
-46:  marker 17/126  40%    |========               [ 17  18  17  126 126 ] GENE9481       2337.96
-45:  marker 125     60%    |============           [ 125 125 125 17  17  ] GENE13598      2348.04
-44:  marker 75      80%    |================       [ 75  75  16  75  75  ] GENE3592       2354.74
-43:  marker 16      80%    |================       [ 16  16  75  16  16  ] GENE9482       2354.74
-42:  marker 73      100%   |====================   [ 73  73  73  73  73  ] GENE3595       2377.05
-41:  marker 13      100%   |====================   [ 13  13  13  13  13  ] GENE9486       2384.16
-40:  marker 71      100%   |====================   [ 71  71  71  71  71  ] GENE3597       2401.58
-39:  marker 74      100%   |====================   [ 74  74  74  74  74  ] GENE3594       2411.15
-38:  marker 15      100%   |====================   [ 15  15  15  15  15  ] GENE9483       2431.02
-37:  marker 124     100%   |====================   [ 124 124 124 124 124 ] GENE13599      2455.6
-36:  marker 147     100%   |====================   [ 147 147 147 147 147 ] GENE13191      2486.63
-35:  marker 14      80%    |================       [ 14  14  14  14  72  ] GENE9485       2498.14
-34:  marker 72      80%    |================       [ 72  72  72  72  14  ] GENE3596       2506.43
-33:  marker 70      100%   |====================   [ 70  70  70  70  70  ] GENE3598       2529.94
-32:  marker 12      100%   |====================   [ 12  12  12  12  12  ] GENE9489       2568.28
-31:  marker 10      100%   |====================   [ 10  10  10  10  10  ] GENE9491       2598.28
-30:  marker 68      100%   |====================   [ 68  68  68  68  68  ] GENE3601       2645.77
-29:  marker 11      80%    |================       [ 11  11  11  11  95  ] GENE9490       2686.78
-28:  marker 95      80%    |================       [ 95  95  95  95  11  ] GENE3484       2695.07
-27:  marker 158     100%   |====================   [ 158 158 158 158 158 ] C21_380-P4     2695.07
-26:  marker 135     80%    |================       [ 123 135 135 135 135 ] GENE13558      2697.77
-25:  marker 123     80%    |================       [ 135 123 123 123 123 ] GENE13600      2697.77
-24:  marker 59      100%   |====================   [ 59  59  59  59  59  ] GENE5757       2705.8
-23:  marker 69      100%   |====================   [ 69  69  69  69  69  ] GENE3600       2722.38
-22:  marker 120     100%   |====================   [ 120 120 120 120 120 ] GENE1878       2742.74
-21:  marker 159     100%   |====================   [ 159 159 159 159 159 ] C21_380-H4     2757.14
-20:  marker 122     100%   |====================   [ 122 122 122 122 122 ] GENE13601      2780.65
-19:  marker 9       100%   |====================   [ 9   9   9   9   9   ] GENE9493       2798.41
-18:  marker 67      100%   |====================   [ 67  67  67  67  67  ] GENE3602       2814.12
-17:  marker 8       100%   |====================   [ 8   8   8   8   8   ] GENE9494       2846.02
-16:  marker 6       100%   |====================   [ 6   6   6   6   6   ] GENE9499       2875.09
-15:  marker 62      100%   |====================   [ 62  62  62  62  62  ] GENE3609       2894.47
-14:  marker 4       100%   |====================   [ 4   4   4   4   4   ] GENE9501       2912.23
-13:  marker 2       100%   |====================   [ 2   2   2   2   2   ] GENE9503       2932.33
-12:  marker 155     100%   |====================   [ 155 155 155 155 155 ] C21_381-M17    2935.05
-11:  marker 60      100%   |====================   [ 60  60  60  60  60  ] GENE3612       2943.38
-10:  marker 3       100%   |====================   [ 3   3   3   3   3   ] GENE9502       2948.48
-9:   marker 61      100%   |====================   [ 61  61  61  61  61  ] GENE3610       2962.01
-8:   marker 7       60%    |============           [ 7   7   7   66  5   ] GENE9496       2985.12
-7:   marker 66      60%    |============           [ 66  66  66  7   146 ] GENE3605       2990.37
-6:   marker 65      80%    |================       [ 65  65  65  65  121 ] GENE3606       3013.88
-5:   marker 121     80%    |================       [ 121 121 121 121 65  ] GENE13602      3049.52
-4:   marker 146     80%    |================       [ 146 146 146 146 66  ] GENE13192      3063.72
-3:   marker 5       80%    |================       [ 5   5   5   5   7   ] GENE9500       3069.13
-2:   marker 64      100%   |====================   [ 64  64  64  64  64  ] GENE3607       3077.72
-1:   marker 63      100%   |====================   [ 63  63  63  63  63  ] GENE3608       3121.01